PDB entry 6j55

View 6j55 on RCSB PDB site
Description: Crystal structure of an iron superoxide dismutate (FeSOD) from a pathogenic Acanthamoeba castellanii
Class: oxidoreductase
Keywords: iron superoxide dismutase, Acanthamoeba castellanii, OXIDOREDUCTASE
Deposited on 2019-01-10, released 2019-07-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-11-20, with a file datestamp of 2019-11-15.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • expression tag (3-7)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55a1, d6j55a2, d6j55a3
  • Chain 'B':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • expression tag (3-7)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55b1, d6j55b2, d6j55b3
  • Chain 'C':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • expression tag (3-7)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55c1, d6j55c2, d6j55c3
  • Chain 'D':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • expression tag (4-7)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55d1, d6j55d2, d6j55d3
  • Chain 'E':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55e1, d6j55e2
  • Chain 'F':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (Start-204)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55f1, d6j55f2
  • Chain 'G':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (Start-204)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55g1, d6j55g2
  • Chain 'H':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55h1, d6j55h2
  • Chain 'I':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55i1, d6j55i2
  • Chain 'J':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55j1, d6j55j2
  • Chain 'K':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-204)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55k1, d6j55k2
  • Chain 'L':
    Compound: superoxide dismutase
    Species: Acanthamoeba castellanii [TaxId:5755]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5IZD9 (8-End)
      • expression tag (1-7)
      • conflict (41)
    Domains in SCOPe 2.08: d6j55l1, d6j55l2, d6j55l3
  • Heterogens: FE2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6j55A (A:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55A (A:)
hhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksled
vilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkk
ftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrr
peylnkwwevvnwkfvdqqlkq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6j55B (B:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55B (B:)
hhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksled
vilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkk
ftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrr
peylnkwwevvnwkfvdqqlkq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6j55C (C:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55C (C:)
hhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksled
vilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkk
ftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrr
peylnkwwevvnwkfvdqqlkq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6j55D (D:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55D (D:)
hhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledv
ilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkf
tdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrp
eylnkwwevvnwkfvdqqlkq

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6j55E (E:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55E (E:)
mlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledvilva
kttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkftdsa
ianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrpeyln
kwwevvnwkfvdqqlkq

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6j55F (F:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55F (F:)
lftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledvilvak
ttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkftdsai
anfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrpeylnk
wwevvnwkfvdqqlkq

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6j55G (G:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55G (G:)
lftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledvilvak
ttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkftdsai
anfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrpeylnk
wwevvnwkfvdqqlkq

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6j55H (H:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55H (H:)
mlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledvilva
kttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkftdsa
ianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrpeyln
kwwevvnwkfvdqqlkq

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6j55I (I:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55I (I:)
mlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledvilva
kttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkftdsa
ianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrpeyln
kwwevvnwkfvdqqlkq

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >6j55J (J:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55J (J:)
mlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledvilva
kttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkftdsa
ianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrpeyln
kwwevvnwkfvdqqlkq

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >6j55K (K:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55K (K:)
mlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksledvilva
kttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfkkkftdsa
ianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqnrrpeyln
kwwevvnwkfvdqqlkq

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6j55L (L:)
hhhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenks
ledvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadf
kkkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhq
nrrpeylnkwwevvnwkfvdqqlkq

    Sequence, based on observed residues (ATOM records): (download) 
    >6j55L (L:)
hhhhhgsmlftlndpaylktglepaisaktldfhfnghhktylnktndlvkgtslenksl
edvilvakttnnaalfnnatqlwnhsffwdcmaptnqtgqispeleklikesfgsvadfk
kkftdsaianfgsgwtwlvningkleiqntsnaespvtlrvtplltvdvwehayyldhqn
rrpeylnkwwevvnwkfvdqqlk