PDB entry 6j3w

View 6j3w on RCSB PDB site
Description: Crystal structure of Peptidoglycan recognition protein from camel with two specific tartrate binding sites at 2.07 A resolution.
Class: immune system
Keywords: immune system
Deposited on 2019-01-05, released 2019-01-30
Made obsolete by 7xfw on 2022-05-11

The last revision prior to the SCOPe 2.08 freeze date was dated 2019-01-30, with a file datestamp of 2019-01-25.
Experiment type: XRAY
Resolution: 2.07 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidoglycan recognition protein 1
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j3wa_
  • Chain 'B':
    Compound: Peptidoglycan recognition protein 1
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j3wb_
  • Chain 'C':
    Compound: Peptidoglycan recognition protein 1
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j3wc_
  • Chain 'D':
    Compound: Peptidoglycan recognition protein 1
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j3wd_
  • Heterogens: TLA, EDO, ACT, 6NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6j3wA (A:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

    Sequence, based on observed residues (ATOM records): (download) 
    >6j3wA (A:)
cgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyhvrnlg
wcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppralraaq
nllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6j3wB (B:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

    Sequence, based on observed residues (ATOM records): (download) 
    >6j3wB (B:)
cgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyhvrnlg
wcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppralraaq
nllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6j3wC (C:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

    Sequence, based on observed residues (ATOM records): (download) 
    >6j3wC (C:)
cgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyhvrnlg
wcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppralraaq
nllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6j3wD (D:)
edppacgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyh
vrnlgwcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppra
lraaqnllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra

    Sequence, based on observed residues (ATOM records): (download) 
    >6j3wD (D:)
cgsivprrewralasecrerltrpvryvvvshtagshcdtpascaqqaqnvqsyhvrnlg
wcdvgynfligedglvyegrgwnikgahagptwnpisigisfmgnymnrvpppralraaq
nllacgvalgalrsnyevkghrdvqptlspgdrlyeiiqtwshyra