PDB entry 6j31

View 6j31 on RCSB PDB site
Description: crystal structure analysis of the glycotransferase of kitacinnamycin
Deposited on 2019-01-03, released 2020-01-15
The last revision was dated 2020-01-15, with a file datestamp of 2020-01-10.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: kcn28
    Species: Kitasatospora [TaxId:2063]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31
  • Chain 'B':
    Compound: kcn28
    Species: Kitasatospora [TaxId:2063]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31 (0-End)
  • Chain 'C':
    Compound: kcn28
    Species: Kitasatospora [TaxId:2063]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31
  • Chain 'D':
    Compound: kcn28
    Species: Kitasatospora [TaxId:2063]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31
  • Chain 'E':
    Compound: dbb-dsg-val-mea-val-gly-gly-dva-dle
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31 (0-8)
  • Chain 'F':
    Compound: dbb-dsg-val-mea-val-gly-gly-dva-dle
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31 (0-8)
  • Chain 'G':
    Compound: dbb-dsg-val-mea-val-gly-gly-dva-dle
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31 (0-8)
  • Chain 'H':
    Compound: dbb-dsg-val-mea-val-gly-gly-dva-dle
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J31 (0-8)
  • Heterogens: BG9, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6j31A (A:)
mprpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsa
lpstdttegrvtdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnw
gipsiqisptwvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvn
lperslvlvprflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshlt
nqlpfyetcvevfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfv
thggmggiqeglfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvel
asdpavaerlsglrrelrahggtmraadlierqlpa

    Sequence, based on observed residues (ATOM records):
    >6j31A (A:)
prpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsal
ptdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnwgipsiqispt
wvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvnlperslvlvp
rflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshltnqlpfyetcv
evfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfvthggmggiqe
glfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvelasdpavaerl
sglrrelrahggtmraadlierqlp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6j31B (B:)
mprpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsa
lpstdttegrvtdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnw
gipsiqisptwvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvn
lperslvlvprflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshlt
nqlpfyetcvevfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfv
thggmggiqeglfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvel
asdpavaerlsglrrelrahggtmraadlierqlpa

    Sequence, based on observed residues (ATOM records):
    >6j31B (B:)
mprpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsa
lpvtdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnwgipsiqis
ptwvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvnlperslvl
vprflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshltnqlpfyet
cvevfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfvthggmggi
qeglfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvelasdpavae
rlsglrrelrahggtmraadlierqlp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6j31C (C:)
mprpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsa
lpstdttegrvtdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnw
gipsiqisptwvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvn
lperslvlvprflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshlt
nqlpfyetcvevfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfv
thggmggiqeglfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvel
asdpavaerlsglrrelrahggtmraadlierqlpa

    Sequence, based on observed residues (ATOM records):
    >6j31C (C:)
prpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsal
psvtdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnwgipsiqis
ptwvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvnlperslvl
vprflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshltnqlpfyet
cvevfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfvthggmggi
qeglfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvelasdpavae
rlsglrrelrahggtmraadlierqlp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6j31D (D:)
mprpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsa
lpstdttegrvtdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnw
gipsiqisptwvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvn
lperslvlvprflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshlt
nqlpfyetcvevfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfv
thggmggiqeglfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvel
asdpavaerlsglrrelrahggtmraadlierqlpa

    Sequence, based on observed residues (ATOM records):
    >6j31D (D:)
prpghiamvsvpsrghlhpslelirelvarghrvtyandpsvaaavtetgaelvpytsal
psvtdqiaqmdvflddavgmlpqlraayeedrpdvflydvlayparvlamnwgipsiqis
ptwvmpekyrermapvveqlkqdprgaahyrrfdawledsgvpgidagdlvnlperslvl
vprflqpdaddvdekrftfigpclgrrahqgdwkrpagaekvalvslgshltnqlpfyet
cvevfaalpdwhlvlqigrhvdagelgelppnvevhnwvpqlavleqadvfvthggmggi
qeglfsgvpmvvapqandqpanaesvvglgiarridiatvtpdrlraavvelasdpavae
rlsglrrelrahggtmraadlierqlp

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6j31E (E:)
xnvfvggvl

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6j31F (F:)
xnvfvggvl

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6j31G (G:)
xnvfvggvl

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6j31H (H:)
xnvfvggvl