PDB entry 6j2v

View 6j2v on RCSB PDB site
Description: GABA aminotransferase from Corynebacterium glutamicum
Class: transferase
Keywords: transferase
Deposited on 2019-01-03, released 2020-01-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PLP-dependent aminotransferases
    Species: Corynebacterium glutamicum ATCC 13032 [TaxId:196627]
    Gene: Cgl0479
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j2va_
  • Chain 'B':
    Compound: PLP-dependent aminotransferases
    Species: Corynebacterium glutamicum ATCC 13032 [TaxId:196627]
    Gene: Cgl0479
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j2vb_
  • Chain 'C':
    Compound: PLP-dependent aminotransferases
    Species: Corynebacterium glutamicum ATCC 13032 [TaxId:196627]
    Gene: Cgl0479
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j2vc_
  • Chain 'D':
    Compound: PLP-dependent aminotransferases
    Species: Corynebacterium glutamicum ATCC 13032 [TaxId:196627]
    Gene: Cgl0479
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6j2vd_
  • Heterogens: PLZ, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6j2vA (A:)
msyyhhhhhhdydipttenlyfqghmedlsyripqsrtvaeqvpgpkskalderrqaava
ralapglpgyvvdadggiladadgnrfidlasgiavttvggsnaavakavgaaaarftht
cfmvspyetyvamaerlnaltpgdhdkksalfnsgaeavenavkvaraytgkgavvvfdn
ayhgrtnltmamtaknrpyksgfgplaadvyrapmsyplrdglsgpeaaeraisviesqv
gaenlacvviepiqgeggfivpapgflaaistwcrendvvfiadeiqsgflrtgdwfasd
aegvipdvittakgiaggmplsavtgraeimdapgpgalggtyggnpvacaaalaaievm
eqadlktraqeietiirdefaqlsafpevaeirgrgammaielidatgrpnaaltaavaa
rakaegvllltcgtdgnvirllpplviaedtlrdglqvlvaaleretahqkvg

    Sequence, based on observed residues (ATOM records): (download) 
    >6j2vA (A:)
lsyripqsrtvaeqvpgpkskalderrqaavaralapglpgyvvdadggiladadgnrfi
dlasgiavttvggsnaavakavgaaaarfthtcfmvspyetyvamaerlnaltpgdhdkk
salfnsgaeavenavkvaraytgkgavvvfdnayhgrtnltmamtaknrpyksgfgplaa
dvyrapmsyplrdglsgpeaaeraisviesqvgaenlacvviepiqgeggfivpapgfla
aistwcrendvvfiadeiqsgflrtgdwfasdaegvipdvittakgiaggmplsavtgra
eimdapgpgalggtyggnpvacaaalaaievmeqadlktraqeietiirdefaqlsafpe
vaeirgrgammaielidatgrpnaaltaavaarakaegvllltcgtdgnvirllpplvia
edtlrdglqvlvaalereta

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6j2vB (B:)
msyyhhhhhhdydipttenlyfqghmedlsyripqsrtvaeqvpgpkskalderrqaava
ralapglpgyvvdadggiladadgnrfidlasgiavttvggsnaavakavgaaaarftht
cfmvspyetyvamaerlnaltpgdhdkksalfnsgaeavenavkvaraytgkgavvvfdn
ayhgrtnltmamtaknrpyksgfgplaadvyrapmsyplrdglsgpeaaeraisviesqv
gaenlacvviepiqgeggfivpapgflaaistwcrendvvfiadeiqsgflrtgdwfasd
aegvipdvittakgiaggmplsavtgraeimdapgpgalggtyggnpvacaaalaaievm
eqadlktraqeietiirdefaqlsafpevaeirgrgammaielidatgrpnaaltaavaa
rakaegvllltcgtdgnvirllpplviaedtlrdglqvlvaaleretahqkvg

    Sequence, based on observed residues (ATOM records): (download) 
    >6j2vB (B:)
lsyripqsrtvaeqvpgpkskalderrqaavaralapglpgyvvdadggiladadgnrfi
dlasgiavttvggsnaavakavgaaaarfthtcfmvspyetyvamaerlnaltpgdhdkk
salfnsgaeavenavkvaraytgkgavvvfdnayhgrtnltmamtaknrpyksgfgplaa
dvyrapmsyplrdglsgpeaaeraisviesqvgaenlacvviepiqgeggfivpapgfla
aistwcrendvvfiadeiqsgflrtgdwfasdaegvipdvittakgiaggmplsavtgra
eimdapgpgalggtyggnpvacaaalaaievmeqadlktraqeietiirdefaqlsafpe
vaeirgrgammaielidatgrpnaaltaavaarakaegvllltcgtdgnvirllpplvia
edtlrdglqvlvaalereta

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6j2vC (C:)
msyyhhhhhhdydipttenlyfqghmedlsyripqsrtvaeqvpgpkskalderrqaava
ralapglpgyvvdadggiladadgnrfidlasgiavttvggsnaavakavgaaaarftht
cfmvspyetyvamaerlnaltpgdhdkksalfnsgaeavenavkvaraytgkgavvvfdn
ayhgrtnltmamtaknrpyksgfgplaadvyrapmsyplrdglsgpeaaeraisviesqv
gaenlacvviepiqgeggfivpapgflaaistwcrendvvfiadeiqsgflrtgdwfasd
aegvipdvittakgiaggmplsavtgraeimdapgpgalggtyggnpvacaaalaaievm
eqadlktraqeietiirdefaqlsafpevaeirgrgammaielidatgrpnaaltaavaa
rakaegvllltcgtdgnvirllpplviaedtlrdglqvlvaaleretahqkvg

    Sequence, based on observed residues (ATOM records): (download) 
    >6j2vC (C:)
lsyripqsrtvaeqvpgpkskalderrqaavaralapglpgyvvdadggiladadgnrfi
dlasgiavttvggsnaavakavgaaaarfthtcfmvspyetyvamaerlnaltpgdhdkk
salfnsgaeavenavkvaraytgkgavvvfdnayhgrtnltmamtaknrpyksgfgplaa
dvyrapmsyplrdglsgpeaaeraisviesqvgaenlacvviepiqgeggfivpapgfla
aistwcrendvvfiadeiqsgflrtgdwfasdaegvipdvittakgiaggmplsavtgra
eimdapgpgalggtyggnpvacaaalaaievmeqadlktraqeietiirdefaqlsafpe
vaeirgrgammaielidatgrpnaaltaavaarakaegvllltcgtdgnvirllpplvia
edtlrdglqvlvaalereta

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6j2vD (D:)
msyyhhhhhhdydipttenlyfqghmedlsyripqsrtvaeqvpgpkskalderrqaava
ralapglpgyvvdadggiladadgnrfidlasgiavttvggsnaavakavgaaaarftht
cfmvspyetyvamaerlnaltpgdhdkksalfnsgaeavenavkvaraytgkgavvvfdn
ayhgrtnltmamtaknrpyksgfgplaadvyrapmsyplrdglsgpeaaeraisviesqv
gaenlacvviepiqgeggfivpapgflaaistwcrendvvfiadeiqsgflrtgdwfasd
aegvipdvittakgiaggmplsavtgraeimdapgpgalggtyggnpvacaaalaaievm
eqadlktraqeietiirdefaqlsafpevaeirgrgammaielidatgrpnaaltaavaa
rakaegvllltcgtdgnvirllpplviaedtlrdglqvlvaaleretahqkvg

    Sequence, based on observed residues (ATOM records): (download) 
    >6j2vD (D:)
lsyripqsrtvaeqvpgpkskalderrqaavaralapglpgyvvdadggiladadgnrfi
dlasgiavttvggsnaavakavgaaaarfthtcfmvspyetyvamaerlnaltpgdhdkk
salfnsgaeavenavkvaraytgkgavvvfdnayhgrtnltmamtaknrpyksgfgplaa
dvyrapmsyplrdglsgpeaaeraisviesqvgaenlacvviepiqgeggfivpapgfla
aistwcrendvvfiadeiqsgflrtgdwfasdaegvipdvittakgiaggmplsavtgra
eimdapgpgalggtyggnpvacaaalaaievmeqadlktraqeietiirdefaqlsafpe
vaeirgrgammaielidatgrpnaaltaavaarakaegvllltcgtdgnvirllpplvia
edtlrdglqvlvaalereta