PDB entry 6j2p

View 6j2p on RCSB PDB site
Description: crystal structure of saccharomyces cerevisiae spp1 in complex with h3k4me3
Deposited on 2019-01-02, released 2019-09-11
The last revision was dated 2019-09-11, with a file datestamp of 2019-09-06.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: COMPASS component SPP1
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: sPP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: COMPASS component SPP1
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: sPP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: COMPASS component SPP1
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: sPP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: COMPASS component SPP1
    Species: Saccharomyces cerevisiae S288c [TaxId:559292]
    Gene: sPP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: histone h3
    Species: Saccharomyces cerevisiae S288c, synthetic [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: histone h3
    Species: Saccharomyces cerevisiae S288c, synthetic [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: histone h3
    Species: Saccharomyces cerevisiae S288c, synthetic [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: histone h3
    Species: Saccharomyces cerevisiae S288c, synthetic [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6j2pA (A:)
shnmslpqwcpphstlkrnpttgedvycickrpdygelmvgcdgcddwfhftclhipeqf
kdlvfsfycpycqagitgknkngegslpktlwkrkcrisdcykpclqdskycseehgref
vnd

    Sequence, based on observed residues (ATOM records):
    >6j2pA (A:)
tgedvycickrpdygelmvgcdgcddwfhftclhipeqfkdlvfsfycpycqagitgknk
gslpktlwkrkcrisdcykpclqdskycseehgrefvn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6j2pB (B:)
shnmslpqwcpphstlkrnpttgedvycickrpdygelmvgcdgcddwfhftclhipeqf
kdlvfsfycpycqagitgknkngegslpktlwkrkcrisdcykpclqdskycseehgref
vnd

    Sequence, based on observed residues (ATOM records):
    >6j2pB (B:)
edvycickrpdygelmvgcdgcddwfhftclhipeqfkdlvfsfycpycqagitgkegsl
pktlwkrkcrisdcykpclqdskycseehgref

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6j2pC (C:)
shnmslpqwcpphstlkrnpttgedvycickrpdygelmvgcdgcddwfhftclhipeqf
kdlvfsfycpycqagitgknkngegslpktlwkrkcrisdcykpclqdskycseehgref
vnd

    Sequence, based on observed residues (ATOM records):
    >6j2pC (C:)
edvycickrpdygelmvgcdgcddwfhftclhipeqfkdlvfsfycpycqagitgkgslp
ktlwkrkcrisdcykpclqdskycseehgr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6j2pD (D:)
shnmslpqwcpphstlkrnpttgedvycickrpdygelmvgcdgcddwfhftclhipeqf
kdlvfsfycpycqagitgknkngegslpktlwkrkcrisdcykpclqdskycseehgref
vnd

    Sequence, based on observed residues (ATOM records):
    >6j2pD (D:)
gedvycickrpdygelmvgcdgcddwfhftclhipeqfkdlvfsfycpycqagitgkegs
lpktlwkrkcrisdcykpclqdskycseehgr

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6j2pE (E:)
artkqta

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6j2pF (F:)
artkqta

    Sequence, based on observed residues (ATOM records):
    >6j2pF (F:)
artkqt

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6j2pG (G:)
artkqta

    Sequence, based on observed residues (ATOM records):
    >6j2pG (G:)
artkqt

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6j2pH (H:)
artkqta

    Sequence, based on observed residues (ATOM records):
    >6j2pH (H:)
artkqt