PDB entry 6j26

View 6j26 on RCSB PDB site
Description: crystal structure of the branched-chain polyamine synthase from thermococcus kodakarensis (tk-bpsa) in complex with n4- bis(aminopropyl)spermidine and 5'-methylthioadenosine
Deposited on 2018-12-31, released 2019-06-26
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: N(4)-bis(aminopropyl)spermidine synthase
    Species: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) [TaxId:69014]
    Gene: bpsA, TK1691
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5JIZ3 (20-370)
      • expression tag (18-19)
  • Chain 'B':
    Compound: N(4)-bis(aminopropyl)spermidine synthase
    Species: Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) [TaxId:69014]
    Gene: bpsA, TK1691
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5JIZ3 (20-370)
      • expression tag (18-19)
  • Heterogens: MTA, B5L, FE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6j26A (A:)
mgsshhhhhhssglvprgshmreiiervkekttipvyertienvlsaiqasgdvwrivdl
seeplplvvavvtalyelgyvafennqviltrkgkelvekygigpradytcshcqgrtve
idafselleqfkeitrdrpepahqfdqayvtpettvarvalmhsrgdlenkevfvlgddd
ltsvalmlsglpkriavldiderltkfiekaadeigyenieiftfdlrkplpdyalhkfd
tfitdppetveairafvgrgiatlkgpgcagyfgitrressldkwreiqrvllnefgvvi
tdiirnfneyvnwgyveetrawrllpikvkpsynwyksymfriqtlegskgfedeitvgq
elyddeesstt

    Sequence, based on observed residues (ATOM records):
    >6j26A (A:)
shmreiiervkekttipvyertienvlsaiqasgdvwrivdlseeplplvvavvtalyel
gyvafennqviltrkgkelvekygigpradytcshcqgrtveidafselleqfkeitrdr
pepahqfdqayvtpettvarvalmhsrgdlenkevfvlgdddltsvalmlsglpkriavl
diderltkfiekaadeigyenieiftfdlrkplpdyalhkfdtfitdppetveairafvg
rgiatlkgpgcagyfgitrressldkwreiqrvllnefgvvitdiirnfneyvnwgyvee
trawrllpikvkpsynwyksymfriqtlegskgfedeitvgqelyddeesstt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6j26B (B:)
mgsshhhhhhssglvprgshmreiiervkekttipvyertienvlsaiqasgdvwrivdl
seeplplvvavvtalyelgyvafennqviltrkgkelvekygigpradytcshcqgrtve
idafselleqfkeitrdrpepahqfdqayvtpettvarvalmhsrgdlenkevfvlgddd
ltsvalmlsglpkriavldiderltkfiekaadeigyenieiftfdlrkplpdyalhkfd
tfitdppetveairafvgrgiatlkgpgcagyfgitrressldkwreiqrvllnefgvvi
tdiirnfneyvnwgyveetrawrllpikvkpsynwyksymfriqtlegskgfedeitvgq
elyddeesstt

    Sequence, based on observed residues (ATOM records):
    >6j26B (B:)
shmreiiervkekttipvyertienvlsaiqasgdvwrivdlseeplplvvavvtalyel
gyvafennqviltrkgkelvekygigpradytcshcqgrtveidafselleqfkeitrdr
pepahqfdqayvtpettvarvalmhsrgdlenkevfvlgdddltsvalmlsglpkriavl
diderltkfiekaadeigyenieiftfdlrkplpdyalhkfdtfitdppetveairafvg
rgiatlkgpgcagyfgitrressldkwreiqrvllnefgvvitdiirnfneyvnwgyvee
trawrllpikvkpsynwyksymfriqtlegskgfedeitvgqelyddeesstt