PDB entry 6j0x

View 6j0x on RCSB PDB site
Description: crystal structure of yeast rtt107 and mms22
Deposited on 2018-12-27, released 2019-08-14
The last revision was dated 2020-02-26, with a file datestamp of 2020-02-21.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Regulator of Ty1 transposition protein 107
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: RTT107, ESC4, YHR154W
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Regulator of Ty1 transposition protein 107
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: RTT107, ESC4, YHR154W
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Regulator of Ty1 transposition protein 107
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: RTT107, ESC4, YHR154W
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Regulator of Ty1 transposition protein 107
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: RTT107, ESC4, YHR154W
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Peptide from E3 ubiquitin-protein ligase substrate receptor MMS22
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: MMS22, SLM2, YLR320W
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Peptide from E3 ubiquitin-protein ligase substrate receptor MMS22
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: MMS22, SLM2, YLR320W
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Peptide from E3 ubiquitin-protein ligase substrate receptor MMS22
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: MMS22, SLM2, YLR320W
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Peptide from E3 ubiquitin-protein ligase substrate receptor MMS22
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: MMS22, SLM2, YLR320W
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6j0xA (A:)
mstsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwf
mnkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfh
llrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvskl
tfgsfsssstnkhtekplrewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlf
akweevigdkqtsssqltlhpnktlfknhhfaispdlnfftplywflkgfiedldgkvtp
lsfsddlksvyqafpdidcyighsanspilektksikpeihvgnvswlfymfalqkftpv
sqcklihqpfhaklftskeltvaytnyfgsqrfyiqrlveilgglstpeltrknthlitk
stigkkfkvakkwsldpqnaiivtnhmwleqcymnnsklnpkdsrfqnfklddnmgwnig
qigmdhsslptpknlsmvtydtqsisekppptn

    Sequence, based on observed residues (ATOM records):
    >6j0xA (A:)
stsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwfm
nkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfhl
lrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvsklt
ewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlfakweevigdkqtsssqltl
hpnktlfknhhfaispdlnfftplywflkgfiedldgkvtplsfsddlksvyqafpdidc
yighsanspilektksikpeihvgnvswlfymfalqkftpvsqcklihqpfhaklftske
ltvaytnyfgsqrfyiqrlveilgglstpeltrknthlitkstigkkfkvakkwsldpqn
aiivtnhmwleqcymnnsklnpkdsrfqnfklddnmgwnigqigm

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6j0xB (B:)
mstsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwf
mnkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfh
llrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvskl
tfgsfsssstnkhtekplrewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlf
akweevigdkqtsssqltlhpnktlfknhhfaispdlnfftplywflkgfiedldgkvtp
lsfsddlksvyqafpdidcyighsanspilektksikpeihvgnvswlfymfalqkftpv
sqcklihqpfhaklftskeltvaytnyfgsqrfyiqrlveilgglstpeltrknthlitk
stigkkfkvakkwsldpqnaiivtnhmwleqcymnnsklnpkdsrfqnfklddnmgwnig
qigmdhsslptpknlsmvtydtqsisekppptn

    Sequence, based on observed residues (ATOM records):
    >6j0xB (B:)
stsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwfm
nkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfhl
lrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvsklt
ewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlfakweevigdkqtsssqltl
hpnktlfknhhfaispdlnfftplywflkgfiedldgkvtplsfsddlksvyqafpdidc
yighsanspilektksikpeihvgnvswlfymfalqkftpvsqcklihqpfhaklftske
ltvaytnyfgsqrfyiqrlveilgglstpeltrknthlitkstigkkfkvakkwsldpqn
aiivtnhmwleqcymnnsklnpkdsrfqnfklddnmgwnigqigmd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6j0xC (C:)
mstsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwf
mnkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfh
llrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvskl
tfgsfsssstnkhtekplrewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlf
akweevigdkqtsssqltlhpnktlfknhhfaispdlnfftplywflkgfiedldgkvtp
lsfsddlksvyqafpdidcyighsanspilektksikpeihvgnvswlfymfalqkftpv
sqcklihqpfhaklftskeltvaytnyfgsqrfyiqrlveilgglstpeltrknthlitk
stigkkfkvakkwsldpqnaiivtnhmwleqcymnnsklnpkdsrfqnfklddnmgwnig
qigmdhsslptpknlsmvtydtqsisekppptn

    Sequence, based on observed residues (ATOM records):
    >6j0xC (C:)
stsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwfm
nkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfhl
lrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvsklt
ewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlfakweevigdsssqltlhpn
ktlfknhhfaispdlnfftplywflkgfiedldgkvtplsfsddlksvyqafpdidcyig
hsanspilektksikpeihvgnvswlfymfalqkftpvsqcklihqpfhaklftskeltv
aytnyfgsqrfyiqrlveilgglstpeltrknthlitkstigkkfkvakkwsldpqnaii
vtnhmwleqcymnnsklnpkdsrfqnfklddnmgwnigqigmd

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6j0xD (D:)
mstsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwf
mnkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfh
llrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvskl
tfgsfsssstnkhtekplrewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlf
akweevigdkqtsssqltlhpnktlfknhhfaispdlnfftplywflkgfiedldgkvtp
lsfsddlksvyqafpdidcyighsanspilektksikpeihvgnvswlfymfalqkftpv
sqcklihqpfhaklftskeltvaytnyfgsqrfyiqrlveilgglstpeltrknthlitk
stigkkfkvakkwsldpqnaiivtnhmwleqcymnnsklnpkdsrfqnfklddnmgwnig
qigmdhsslptpknlsmvtydtqsisekppptn

    Sequence, based on observed residues (ATOM records):
    >6j0xD (D:)
stsllfeqlnflilvaaeaelpiahstrkllmdnscnncqiyelynenlkdvktdkdwfm
nkfgpqtvhfvisntinfpfykivyfdllipvvshtwvqdsvktkrhlrtnmyspnpfhl
lrdcqvyiskssfnkceyilysdllhllggtlvnyisnrtthvivqspqdpiiatvsklt
rewkfvypiwilyhfkmakplkgelatlceldmqdtseeqlfakweevigdkqltlhpnk
tlfknhhfaispdlnfftplywflkgfiedldgkvtplsfsddlksvyqafpdidcyigh
sanspilektksikpeihvgnvswlfymfalqkftpvsqcklihqpfhaklftskeltva
ytnyfgsqrfyiqrlveilgglstpeltrknthlitkstigkkfkvakkwsldpqnaiiv
tnhmwleqcymnnsklnpkdsrfqnfklddnmgwnigqigmd

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6j0xE (E:)
siiyepefnenylwae

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6j0xF (F:)
siiyepefnenylwae

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6j0xG (G:)
siiyepefnenylwae

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6j0xH (H:)
siiyepefnenylwae