PDB entry 6j00

View 6j00 on RCSB PDB site
Description: the rna-dependent rna polymerase domain of dengue 3 ns5
Deposited on 2018-12-20, released 2019-12-25
The last revision was dated 2021-01-13, with a file datestamp of 2021-01-08.
Experiment type: XRAY
Resolution: 2.14 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Genome polyprotein
    Species: Dengue virus 3 [TaxId:11069]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6j00A (A:)
    tiekdvdlgagtrhvnaepetpnmdvigerirrikeehsstwhyddenpyktwayhgsye
    vkatgsassmingvvklltkpwdvvptvtqmamtdttpfgqqrvfkekvdtrtpkpmpgt
    rkvmeitagwlwrtlgrnkrprlctreeftkkvrtnaamgavfteenqwdsaraavedee
    fwklvdrerelhkqgkcgscvynmmgkrekklgefgkakgsraiwymwlgarylefealg
    flnedhwfsrensysgvegeglhklgyilrdiskipggamyaddtagwdtriteddlhne
    ekitqqmdpehrqlanaifkltyqnkvvkvqrptpkgtvmdiisrkdqrgsgqvgtygln
    tftnmeaqlirqmegegvlsktdlenphllekkitqwletkgverlkrmaisgddcvvkp
    iddrfanallalndmgkvrkdipqwqpskgwhdwqqvpfcshhfhelimkdgrklvvpcr
    pqdeligrarisqgagwslketaclgkayaqmwalmyfhrrdlrlasnaicsavpvhwvp
    tsrttwsihahhqwmttedmltvwnrvwiednpwmedktpvttwedvpylgkredqwcgs
    ligltsratwaqniltaiqqvrsligneefldympsmkrfrkeeese
    

    Sequence, based on observed residues (ATOM records):
    >6j00A (A:)
    nmdvigerirrikeehsstwhyddenpyktwayhgsyevkatgsassmingvvklltkpw
    dvvptvtqmamtdttpfgqqrvfkekvdtrtpkpmpgtrkvmeitagwlwrtlgrnkrpr
    lctreeftkkvrdsaraavedeefwklvdrerelhkqgkcgscvynmmwlgarylefeal
    gflnedhwfsrensysgvegeglhklgyilrdiskipggamyaddtagwdtriteddlhn
    eekitqqmdpehrqlanaifkltyqnkvvkvqrptpkgtvmdiisrkdqrgsgqvgtygl
    ntftnmeaqlirqmegegvlsktdlenphllekkitqwletkgverlkrmaisgddcvvk
    piddrfanallalndmgkvrkdipqwqpskgwhdwqqvpfcshhfhelimkdgrklvvpc
    rpqdeligrarisqgagwslketaclgkayaqmwalmyfhrrdlrlasnaicsavpvhwv
    ptsrttwsihahhqwmttedmltvwnrvwiednpwmedktpvttwedvpylgkredqwcg
    sligltsratwaqniltaiqqvrsligneefldym