PDB entry 6izl

View 6izl on RCSB PDB site
Description: cryo-em structure of mud crab tombus-like virus at 3.3 angstroms resolution
Deposited on 2018-12-19, released 2019-01-16
The last revision was dated 2019-04-03, with a file datestamp of 2019-03-29.
Experiment type: EM
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: mud crab tombus-like virus
    Species: Wenzhou tombus-like virus 18 [TaxId:1923671]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: mud crab tombus-like virus
    Species: Wenzhou tombus-like virus 18 [TaxId:1923671]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: mud crab tombus-like virus
    Species: Wenzhou tombus-like virus 18 [TaxId:1923671]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6izlA (A:)
mtgsnrranagrktqpkpqrkpraprrpkvqnapriqqgggpvpllesnsnmrqmhngmt
rvvgsdylgvvsvagnpadaaakvrkvlsvspssfpgtrltqmsdlweryvfrqfrvryv
psvpntlacqvmvyqdtdpqddptaikdadallrqataqtgsqqwnfnsakvihlakrsd
nqlyytgpvkenprfnqqgvvyfiqvsqaldmngkpltadmecgslyvdwvidfqtpqvn
psavearlpsagfftrqilvndkltfaaqasltvaltalsatpkvwlegptrvdlatlgg
pggnlvqieltraqpgdytvkfvgcdsvtlvssapia

    Sequence, based on observed residues (ATOM records):
    >6izlA (A:)
nmrqmhngmtrvvgsdylgvvsvagnpadaaakvrkvlsvspssfpgtrltqmsdlwery
vfrqfrvryvpsvpntlacqvmvyqdtdpqddptaikdadallrqataqtgsqqwnfnsa
kvihlakrsdnqlyytgpvkenprfnqqgvvyfiqvsqaldmngkpltadmecgslyvdw
vidfqtpqvnpsa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6izlB (B:)
mtgsnrranagrktqpkpqrkpraprrpkvqnapriqqgggpvpllesnsnmrqmhngmt
rvvgsdylgvvsvagnpadaaakvrkvlsvspssfpgtrltqmsdlweryvfrqfrvryv
psvpntlacqvmvyqdtdpqddptaikdadallrqataqtgsqqwnfnsakvihlakrsd
nqlyytgpvkenprfnqqgvvyfiqvsqaldmngkpltadmecgslyvdwvidfqtpqvn
psavearlpsagfftrqilvndkltfaaqasltvaltalsatpkvwlegptrvdlatlgg
pggnlvqieltraqpgdytvkfvgcdsvtlvssapia

    Sequence, based on observed residues (ATOM records):
    >6izlB (B:)
gpvpllesnsnmrqmhngmtrvvgsdylgvvsvagnpadaaakvrkvlsvspssfpgtrl
tqmsdlweryvfrqfrvryvpsvpntlacqvmvyqdtdpqddptaikdadallrqataqt
gsqqwnfnsakvihlakrsdnqlyytgpvkenprfnqqgvvyfiqvsqaldmngkpltad
mecgslyvdwvidfqtpqvnp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6izlC (C:)
mtgsnrranagrktqpkpqrkpraprrpkvqnapriqqgggpvpllesnsnmrqmhngmt
rvvgsdylgvvsvagnpadaaakvrkvlsvspssfpgtrltqmsdlweryvfrqfrvryv
psvpntlacqvmvyqdtdpqddptaikdadallrqataqtgsqqwnfnsakvihlakrsd
nqlyytgpvkenprfnqqgvvyfiqvsqaldmngkpltadmecgslyvdwvidfqtpqvn
psavearlpsagfftrqilvndkltfaaqasltvaltalsatpkvwlegptrvdlatlgg
pggnlvqieltraqpgdytvkfvgcdsvtlvssapia

    Sequence, based on observed residues (ATOM records):
    >6izlC (C:)
vqnapriqqgggpvpllesnsnmrqmhngmtrvvgsdylgvvsvagnpadaaakvrkvls
vspssfpgtrltqmsdlweryvfrqfrvryvpsvpntlacqvmvyqdtdpqddptaikda
dallrqataqtgsqqwnfnsakvihlakrsdnqlyytgpvkenprfnqqgvvyfiqvsqa
ldmngkpltadmecgslyvdwvidfqtpqvnpsavearlp