PDB entry 6izh

View 6izh on RCSB PDB site
Description: Crystal structure of deaminase AmnE from Pseudomonas sp. AP-3
Class: hydrolase
Keywords: Hexamer, HYDROLASE
Deposited on 2018-12-19, released 2019-01-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-16, with a file datestamp of 2019-10-11.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izha_
  • Chain 'B':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhb_
  • Chain 'C':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhc_
  • Chain 'D':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhd_
  • Chain 'E':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhe_
  • Chain 'F':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhf_
  • Chain 'G':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhg_
  • Chain 'H':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhh_
  • Chain 'I':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhi_
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6izhA (A:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhA (A:)
adnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielq
trevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhq
lphpqlvieikvvaykpl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6izhB (B:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhB (B:)
saklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtre
visnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlph
pqlvieikvvaykpl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6izhC (C:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhC (C:)
adnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielq
trevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhq
lphpqlvieikvvaykpl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6izhD (D:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhD (D:)
dnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqt
revisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhql
phpqlvieikvvaykpl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6izhE (E:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhE (E:)
fphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtrevisnirdilqsvga
dlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlphpqlvieikvvaykp
l

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6izhF (F:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhF (F:)
dnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqt
revisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhql
phpqlvieikvvaykpl

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6izhG (G:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhG (G:)
saklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtre
visnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlph
pqlvieikvvaykpl

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6izhH (H:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhH (H:)
saklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtre
visnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlph
pqlvieikvvaykpl

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6izhI (I:)
mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
avhqlphpqlvieikvvaykpl

    Sequence, based on observed residues (ATOM records): (download) 
    >6izhI (I:)
nsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtr
evisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlp
hpqlvieikvvaykpl