PDB entry 6izh

View 6izh on RCSB PDB site
Description: Crystal structure of deaminase AmnE from Pseudomonas sp. AP-3
Class: hydrolase
Keywords: Hexamer, HYDROLASE
Deposited on 2018-12-19, released 2019-01-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-16, with a file datestamp of 2019-10-11.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izha_
  • Chain 'B':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhb_
  • Chain 'C':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhc_
  • Chain 'D':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhd_
  • Chain 'E':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhe_
  • Chain 'F':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhf_
  • Chain 'G':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhg_
  • Chain 'H':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhh_
  • Chain 'I':
    Compound: 2-aminomuconate deaminase
    Species: Pseudomonas sp [TaxId:306]
    Gene: amnD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6izhi_
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6izhA (A:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhA (A:)
    adnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielq
    trevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhq
    lphpqlvieikvvaykpl
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6izhB (B:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhB (B:)
    saklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtre
    visnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlph
    pqlvieikvvaykpl
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >6izhC (C:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhC (C:)
    adnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielq
    trevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhq
    lphpqlvieikvvaykpl
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >6izhD (D:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhD (D:)
    dnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqt
    revisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhql
    phpqlvieikvvaykpl
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >6izhE (E:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhE (E:)
    fphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtrevisnirdilqsvga
    dlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlphpqlvieikvvaykp
    l
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >6izhF (F:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhF (F:)
    dnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqt
    revisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhql
    phpqlvieikvvaykpl
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >6izhG (G:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhG (G:)
    saklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtre
    visnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlph
    pqlvieikvvaykpl
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6izhH (H:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhH (H:)
    saklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtre
    visnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlph
    pqlvieikvvaykpl
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >6izhI (I:)
    mvskadnsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpn
    ielqtrevisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttv
    avhqlphpqlvieikvvaykpl
    

    Sequence, based on observed residues (ATOM records): (download)
    >6izhI (I:)
    nsaklvegkakpmgsfphvkragdflfvsgtssrrpdntfvgaepddtgrprpnielqtr
    evisnirdilqsvgadlgdvvevcsylvnmndfaaynkvyaeffdatgparttvavhqlp
    hpqlvieikvvaykpl