PDB entry 6ixv

View 6ixv on RCSB PDB site
Description: crystal structure of sh3bp5-rab11a
Deposited on 2018-12-12, released 2019-03-20
The last revision was dated 2019-03-27, with a file datestamp of 2019-03-22.
Experiment type: XRAY
Resolution: 3.8 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SH3 domain-binding protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: SH3BP5, SAB
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: SH3 domain-binding protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: SH3BP5, SAB
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: SH3 domain-binding protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: SH3BP5, SAB
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: SH3 domain-binding protein 5
    Species: Homo sapiens [TaxId:9606]
    Gene: SH3BP5, SAB
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Ras-related protein Rab-11A
    Species: Homo sapiens [TaxId:9606]
    Gene: RAB11A, RAB11
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Ras-related protein Rab-11A
    Species: Homo sapiens [TaxId:9606]
    Gene: RAB11A, RAB11
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Ras-related protein Rab-11A
    Species: Homo sapiens [TaxId:9606]
    Gene: RAB11A, RAB11
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Ras-related protein Rab-11A
    Species: Homo sapiens [TaxId:9606]
    Gene: RAB11A, RAB11
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PO4

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ixvA (A:)
shseepaeilppardeeeeeeegmeqgleeeeevdpriqgeleklnqstddinrretele
darqkfrsvlveatvkldelvkkigkavedskpywearrvarqaqleaqkatqdfqrate
vlraaketislaeqrlleddkrqfdsawqemlnhatqrvmeaeqtktrselvhketaary
naamgrmrqlekklkrainkskpyfelkakyyvqleqlkktvddlqakltlakgeykmal
knlemisdeiherrrssamgprgcgvgae

    Sequence, based on observed residues (ATOM records):
    >6ixvA (A:)
dpriqgeleklnqstddinrreteledarqkfrsvlveatvkldelvkkigkavedskpy
wearrvarqaqleaqkatqdfqratevlraaketislaeqrlleddkrqfdsawqemlnh
atqrvmeaeqtktrselvhketaarynaamgrmrqlekklkrainkskpyfelkakyyvq
leqlkktvddlqakltlakgeykmalknlemisdeiherrrssa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ixvB (B:)
shseepaeilppardeeeeeeegmeqgleeeeevdpriqgeleklnqstddinrretele
darqkfrsvlveatvkldelvkkigkavedskpywearrvarqaqleaqkatqdfqrate
vlraaketislaeqrlleddkrqfdsawqemlnhatqrvmeaeqtktrselvhketaary
naamgrmrqlekklkrainkskpyfelkakyyvqleqlkktvddlqakltlakgeykmal
knlemisdeiherrrssamgprgcgvgae

    Sequence, based on observed residues (ATOM records):
    >6ixvB (B:)
eevdpriqgeleklnqstddinrreteledarqkfrsvlveatvkldelvkkigkaveds
kpywearrvarqaqleaqkatqdfqratevlraaketislaeqrlleddkrqfdsawqem
lnhatqrvmeaeqtktrselvhketaarynaamgrmrqlekklkrainkskpyfelkaky
yvqleqlkktvddlqakltlakgeykmalknlemisdeiherrrss

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ixvC (C:)
shseepaeilppardeeeeeeegmeqgleeeeevdpriqgeleklnqstddinrretele
darqkfrsvlveatvkldelvkkigkavedskpywearrvarqaqleaqkatqdfqrate
vlraaketislaeqrlleddkrqfdsawqemlnhatqrvmeaeqtktrselvhketaary
naamgrmrqlekklkrainkskpyfelkakyyvqleqlkktvddlqakltlakgeykmal
knlemisdeiherrrssamgprgcgvgae

    Sequence, based on observed residues (ATOM records):
    >6ixvC (C:)
vdpriqgeleklnqstddinrreteledarqkfrsvlveatvkldelvkkigkavedskp
ywearrvarqaqleaqkatqdfqratevlraaketislaeqrlleddkrqfdsawqemln
hatqrvmeaeqtktrselvhketaarynaamgrmrqlekklkrainkskpyfelkakyyv
qleqlkktvddlqakltlakgeykmalknlemisdeiherrr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ixvD (D:)
shseepaeilppardeeeeeeegmeqgleeeeevdpriqgeleklnqstddinrretele
darqkfrsvlveatvkldelvkkigkavedskpywearrvarqaqleaqkatqdfqrate
vlraaketislaeqrlleddkrqfdsawqemlnhatqrvmeaeqtktrselvhketaary
naamgrmrqlekklkrainkskpyfelkakyyvqleqlkktvddlqakltlakgeykmal
knlemisdeiherrrssamgprgcgvgae

    Sequence, based on observed residues (ATOM records):
    >6ixvD (D:)
dpriqgeleklnqstddinrreteledarqkfrsvlveatvkldelvkkigkavedskpy
wearrvarqaqleaqkatqdfqratevlraaketislaeqrlleddkrqfdsawqemlnh
atqrvmeaeqtktrselvhketaarynaamgrmrqlekklkrainkskpyfelkakyyvq
leqlkktvddlqakltlakgeykmalknlemisdeiherrrssamg

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ixvE (E:)
shmgtrddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgk
tikaqiwdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsniv
imlvgnksdlrhlravptdearafaeknglsfietsaldstnveaafqtilteiy

    Sequence, based on observed residues (ATOM records):
    >6ixvE (E:)
rddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgktikaq
iwdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsnivimlvg
nksdlrhlravptdearafaeknglsfietsaldstnveaafqtilteiy

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ixvF (F:)
shmgtrddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgk
tikaqiwdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsniv
imlvgnksdlrhlravptdearafaeknglsfietsaldstnveaafqtilteiy

    Sequence, based on observed residues (ATOM records):
    >6ixvF (F:)
rddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgktikaq
iwdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsnivimlvg
nksdlrhlravptdearafaeknglsfietsaldstnveaafqtilteiy

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6ixvG (G:)
shmgtrddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgk
tikaqiwdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsniv
imlvgnksdlrhlravptdearafaeknglsfietsaldstnveaafqtilteiy

    Sequence, based on observed residues (ATOM records):
    >6ixvG (G:)
ddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgktikaqi
wdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsnivimlvgn
khlravptdearafaeknglsfietsaldstnveaafqtilteiy

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6ixvH (H:)
shmgtrddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgk
tikaqiwdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsniv
imlvgnksdlrhlravptdearafaeknglsfietsaldstnveaafqtilteiy

    Sequence, based on observed residues (ATOM records):
    >6ixvH (H:)
rddeydylfkvvligdsgvgksnllsrftrnefnleskstigvefatrsiqvdgktikaq
iwdtagqeryraitsayyrgavgallvydiakhltyenverwlkelrdhadsnivimlvg
nkshlravptdearafaeknglsfietsaldstnveaafqtilteiy