PDB entry 6ixu

View 6ixu on RCSB PDB site
Description: crystal structure of isocitrate dehydrogenase from ostreococcus tauri in complex with isocitrate and mg2+
Deposited on 2018-12-12, released 2019-12-18
Made obsolete by 7e2w on 2021-05-19

The last revision was dated 2021-05-19, with a file datestamp of 2021-05-14.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: isocitrate dehydrogenase
    Species: Ostreococcus tauri [TaxId:70448]
    Gene: BE221DRAFT_192402
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: isocitrate dehydrogenase
    Species: Ostreococcus tauri [TaxId:70448]
    Gene: BE221DRAFT_192402
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: isocitrate dehydrogenase
    Species: Ostreococcus tauri [TaxId:70448]
    Gene: BE221DRAFT_192402
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: isocitrate dehydrogenase
    Species: Ostreococcus tauri [TaxId:70448]
    Gene: BE221DRAFT_192402
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GOL, MG, ICT, FLC, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ixuA (A:)
ghhhhhhhstasskitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknr
ddtedrvlrdvieagkrikaifkeptvtptadqvkrlglrkswgspngamrrgwngitis
rdtihidgvelgykkpvlferhavggeysagyknvgkgkltttftpsegpdagktvvvde
reivdeeaavvtyhnpydnvhdlarfffgrcleakvtpyvvtkktvfkwqepfwqimrtv
fdeefkaqfvaagvmkegeelvhllsdaatmklvqwrqggfgmaahnydgdvltdelaqv
hkspgfitsnlvgvhedgtlikefeashgtvadmdearlrgeetslnplgmvegligamn
haadvhnidrdrthafttkmrtvihqlfregkgtrdlcgpsgltteqfidavaerlda

    Sequence, based on observed residues (ATOM records):
    >6ixuA (A:)
kitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknrddtedrvlrdvie
agkrikaifkeptvtptadqvkrlglrkswgspngamrrgwngitisrdtihidgvelgy
kkpvlferhavggeysagyknvgkgkltttftpsegpdagktvvvdereivdeeaavvty
hnpydnvhdlarfffgrcleakvtpyvvtkktvfkwqepfwqimrtvfdeefkaqfvaag
vmkegeelvhllsdaatmklvqwrqggfgmaahnydgdvltdelaqvhkspgfitsnlvg
vhedgtlikefeashgtvadmdearlrgeetslnplgmvegligamnhaadvhnidrdrt
hafttkmrtvihqlfregkgtrdlcgpsgltteqfidavaerl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ixuB (B:)
ghhhhhhhstasskitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknr
ddtedrvlrdvieagkrikaifkeptvtptadqvkrlglrkswgspngamrrgwngitis
rdtihidgvelgykkpvlferhavggeysagyknvgkgkltttftpsegpdagktvvvde
reivdeeaavvtyhnpydnvhdlarfffgrcleakvtpyvvtkktvfkwqepfwqimrtv
fdeefkaqfvaagvmkegeelvhllsdaatmklvqwrqggfgmaahnydgdvltdelaqv
hkspgfitsnlvgvhedgtlikefeashgtvadmdearlrgeetslnplgmvegligamn
haadvhnidrdrthafttkmrtvihqlfregkgtrdlcgpsgltteqfidavaerlda

    Sequence, based on observed residues (ATOM records):
    >6ixuB (B:)
skitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknrddtedrvlrdvi
eagkrikaifkeptvtptadqvkrlglrkswgspngamrrgwngitisrdtihidgvelg
ykkpvlferhavggeysagyknvgkgkltttftpsegpdagktvvvdereivdeeaavvt
yhnpydnvhdlarfffgrcleakvtpyvvtkktvfkwqepfwqimrtvfdeefkaqfvaa
gvmkegeelvhllsdaatmklvqwrqggfgmaahnydgdvltdelaqvhkspgfitsnlv
gvhedgtlikefeashgtvadmdearlrgeetslnplgmvegligamnhaadvhnidrdr
thafttkmrtvihqlfregkgtrdlcgpsgltteqfidavaerl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ixuC (C:)
ghhhhhhhstasskitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknr
ddtedrvlrdvieagkrikaifkeptvtptadqvkrlglrkswgspngamrrgwngitis
rdtihidgvelgykkpvlferhavggeysagyknvgkgkltttftpsegpdagktvvvde
reivdeeaavvtyhnpydnvhdlarfffgrcleakvtpyvvtkktvfkwqepfwqimrtv
fdeefkaqfvaagvmkegeelvhllsdaatmklvqwrqggfgmaahnydgdvltdelaqv
hkspgfitsnlvgvhedgtlikefeashgtvadmdearlrgeetslnplgmvegligamn
haadvhnidrdrthafttkmrtvihqlfregkgtrdlcgpsgltteqfidavaerlda

    Sequence, based on observed residues (ATOM records):
    >6ixuC (C:)
kitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknrddtedrvlrdvie
agkrikaifkeptvtptadqvklrkswgspngamrrgwngitisrdtihidgvelgykkp
vlferhavggeysagyknvgkgkltttftpsegpdagktvvvdereivdeeaavvtyhnp
ydnvhdlarfffgrcleakvtpyvvtkktvfkwqepfwqimrtvfdeefkaqfvaagvmk
egeelvhllsdaatmklvqwrqggfgmaahnydgdvltdelaqvhkspgfitsnlvgvhe
dgtlikefeashgtvadmdearlrgeetslnplgmvegligamnhaadvhnidrdrthaf
ttkmrtvihqlfregkgtrdlcgpsgltteqfidavaerl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ixuD (D:)
ghhhhhhhstasskitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknr
ddtedrvlrdvieagkrikaifkeptvtptadqvkrlglrkswgspngamrrgwngitis
rdtihidgvelgykkpvlferhavggeysagyknvgkgkltttftpsegpdagktvvvde
reivdeeaavvtyhnpydnvhdlarfffgrcleakvtpyvvtkktvfkwqepfwqimrtv
fdeefkaqfvaagvmkegeelvhllsdaatmklvqwrqggfgmaahnydgdvltdelaqv
hkspgfitsnlvgvhedgtlikefeashgtvadmdearlrgeetslnplgmvegligamn
haadvhnidrdrthafttkmrtvihqlfregkgtrdlcgpsgltteqfidavaerlda

    Sequence, based on observed residues (ATOM records):
    >6ixuD (D:)
skitaapmvyvrgeemtayvmdlirsrwieprvdvggwetfdlraknrddtedrvlrdvi
eagkrikaifkeptvtptadwgspngamrrgwngitisrdtihidgvelgykkpvlferh
avggeysagyknvgkgkltttftpsegpdagktvvvdereivdeeaavvtyhnpydnvhd
larfffgrcleakvtpyvvtkktvfkwqepfwqimrtvfdeefkaqfvaagvmkegeelv
hllsdaatmklvqwrqggfgmaahnydgdvltdelaqvhkspgfitsnlvgvhedgtlik
efeashgtvadmdearlrgeetslnplgmvegligamnhaadvhnidrdrthafttkmrt
vihqlfregkgtrdlcgpsgltteqfidavaerl