PDB entry 6iww

View 6iww on RCSB PDB site
Description: cryo-em structure of the s. typhimurium oxaloacetate decarboxylase beta-gamma sub-complex
Deposited on 2018-12-08, released 2020-06-17
The last revision was dated 2020-08-12, with a file datestamp of 2020-08-07.
Experiment type: EM
Resolution: 3.9 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Oxaloacetate decarboxylase beta chain
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Probable oxaloacetate decarboxylase gamma chain
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Oxaloacetate decarboxylase beta chain
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Probable oxaloacetate decarboxylase gamma chain
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Oxaloacetate decarboxylase beta chain
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Probable oxaloacetate decarboxylase gamma chain
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: LMT

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6iwwA (A:)
meslnallqgmglmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeag
maltalesllahhdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytp
gvlalfykvaigsgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltl
nyfglisftlpqaaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppi
mraltsekerkirmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresg
vverlsdtvqnglinivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlm
akllnlcsknkinpligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsa
iaagvmlkyvlam

    Sequence, based on observed residues (ATOM records):
    >6iwwA (A:)
lmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeagmaltalesllah
hdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytpgvlalfykvaig
sgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltlnyfglisftlpq
aaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppimraltsekerki
rmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresgvverlsdtvqng
linivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlmakllnlcsknki
npligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsaiaagvmlkyvla

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6iwwB (B:)
mgsshhhhhhssglvprgshmtnaalllgegftlmflgmgfvlaflfllifairgmsaav
nrffpepapapkaapaaaapvvddftrlkpviaaaihhhhrlna

    Sequence, based on observed residues (ATOM records):
    >6iwwB (B:)
tnaalllgegftlmflgmgfvlaflfllifairgmsaavnrf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6iwwC (C:)
meslnallqgmglmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeag
maltalesllahhdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytp
gvlalfykvaigsgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltl
nyfglisftlpqaaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppi
mraltsekerkirmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresg
vverlsdtvqnglinivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlm
akllnlcsknkinpligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsa
iaagvmlkyvlam

    Sequence, based on observed residues (ATOM records):
    >6iwwC (C:)
lmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeagmaltalesllah
hdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytpgvlalfykvaig
sgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltlnyfglisftlpq
aaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppimraltsekerki
rmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresgvverlsdtvqng
linivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlmakllnlcsknki
npligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsaiaagvmlkyvla

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6iwwD (D:)
mgsshhhhhhssglvprgshmtnaalllgegftlmflgmgfvlaflfllifairgmsaav
nrffpepapapkaapaaaapvvddftrlkpviaaaihhhhrlna

    Sequence, based on observed residues (ATOM records):
    >6iwwD (D:)
tnaalllgegftlmflgmgfvlaflfllifairgmsaavnrf

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6iwwE (E:)
meslnallqgmglmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeag
maltalesllahhdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytp
gvlalfykvaigsgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltl
nyfglisftlpqaaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppi
mraltsekerkirmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresg
vverlsdtvqnglinivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlm
akllnlcsknkinpligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsa
iaagvmlkyvlam

    Sequence, based on observed residues (ATOM records):
    >6iwwE (E:)
lmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeagmaltalesllah
hdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytpgvlalfykvaig
sgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltlnyfglisftlpq
aaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppimraltsekerki
rmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresgvverlsdtvqng
linivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlmakllnlcsknki
npligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsaiaagvmlkyvla

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6iwwF (F:)
mgsshhhhhhssglvprgshmtnaalllgegftlmflgmgfvlaflfllifairgmsaav
nrffpepapapkaapaaaapvvddftrlkpviaaaihhhhrlna

    Sequence, based on observed residues (ATOM records):
    >6iwwF (F:)
tnaalllgegftlmflgmgfvlaflfllifairgmsaavnrf