PDB entry 6iw1

View 6iw1 on RCSB PDB site
Description: Crystal structure of YFV-17D sE in postfusion state
Class: viral protein
Keywords: Yellow fever virus, Envelope protein, Flavivirus, VIRAL PROTEIN
Deposited on 2018-12-04, released 2019-02-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-02-13, with a file datestamp of 2019-02-08.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope protein E
    Species: Yellow fever virus (strain 17D vaccine) [TaxId:11090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iw1a1, d6iw1a2
  • Chain 'B':
    Compound: Envelope protein E
    Species: Yellow fever virus (strain 17D vaccine) [TaxId:11090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iw1b1, d6iw1b2
  • Chain 'C':
    Compound: Envelope protein E
    Species: Yellow fever virus (strain 17D vaccine) [TaxId:11090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iw1c1, d6iw1c2

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6iw1A (A:)
ahcigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvc
ynavlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakft
caksmslfevdqtkiqyviraqlhvgakqenwntdiktlkfdalsgsqevefigygkatl
ecqvqtavdfgnsyiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaa
tirvlalgnqegslktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykic
tdkmffvknptdtghgtvvmqvkvskgapcripvivaddltaainkgilvtvnpiastnd
devlievnppfgdsyiivgrgdsrltyqwhkegss

    Sequence, based on observed residues (ATOM records): (download) 
    >6iw1A (A:)
cigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvcyn
avlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakftca
ksmslfevdqtkiqyviraqlhdiktlkfdalsgsqevefigygkatlecqvqtavdfgn
syiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaatirvlalgnqeg
slktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykictdkmffvknptd
tghgtvvmqvkvskgapcripvivadaainkgilvtvnpiastnddevlievnppfgdsy
iivgrgdsrltyqwhke

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6iw1B (B:)
ahcigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvc
ynavlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakft
caksmslfevdqtkiqyviraqlhvgakqenwntdiktlkfdalsgsqevefigygkatl
ecqvqtavdfgnsyiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaa
tirvlalgnqegslktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykic
tdkmffvknptdtghgtvvmqvkvskgapcripvivaddltaainkgilvtvnpiastnd
devlievnppfgdsyiivgrgdsrltyqwhkegss

    Sequence, based on observed residues (ATOM records): (download) 
    >6iw1B (B:)
cigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvcyn
avlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakftca
ksmslfevdqtkiqyviraqlhdiktlkfdalsgsqevefigygkatlecqvqtavdfgn
syiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaatirvlalgnqeg
slktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykictdkmffvknptd
tghgtvvmqvkvskgapcripvivaddltaainkgilvtvnpiastnddevlievnppfg
dsyiivgrgdsrltyqwhke

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6iw1C (C:)
ahcigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvc
ynavlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakft
caksmslfevdqtkiqyviraqlhvgakqenwntdiktlkfdalsgsqevefigygkatl
ecqvqtavdfgnsyiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaa
tirvlalgnqegslktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykic
tdkmffvknptdtghgtvvmqvkvskgapcripvivaddltaainkgilvtvnpiastnd
devlievnppfgdsyiivgrgdsrltyqwhkegss

    Sequence, based on observed residues (ATOM records): (download) 
    >6iw1C (C:)
cigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvcyn
avlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakftca
ksmslfevdqtkiqyviraqlhdiktlkfdalsgsqevefigygkatlecqvqtavdfgn
syiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaatirvlalgnqeg
slktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykictdkmffvknptd
tghgtvvmqvkvskgapcripvivadinkgilvtvnpiastnddevlievnppfgdsyii
vgrgdsrltyqwhke