PDB entry 6iw0

View 6iw0 on RCSB PDB site
Description: crystal structure of 5a scfv in complex with yfv-17d se in postfusion state
Deposited on 2018-12-04, released 2019-02-13
The last revision was dated 2019-02-27, with a file datestamp of 2019-02-22.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: N/A
AEROSPACI score: 0.07 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope protein E
    Species: Yellow fever virus (strain 17D vaccine) [TaxId:11090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Heavy chain of monoclonal antibody 5A
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IW0
  • Chain 'L':
    Compound: Light chain of monoclonal antibody 5A
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IW0 (0-End)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6iw0A (A:)
ahcigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvc
ynavlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakft
caksmslfevdqtkiqyviraqlhvgakqenwntdiktlkfdalsgsqevefigygkatl
ecqvqtavdfgnsyiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaa
tirvlalgnqegslktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykic
tdkmffvknptdtghgtvvmqvkvskgapcripvivaddltaainkgilvtvnpiastnd
devlievnppfgdsyiivgrgdsrltyqwhkegss

    Sequence, based on observed residues (ATOM records):
    >6iw0A (A:)
cigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvcyn
avlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakftca
ksmslfevdqtkiqyviraqlhdiktlkfdalsgsqevefigygkatlecqvqtavdfgn
syiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaatirvlalgnqeg
slktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgtsykictdkmffvknptd
tghgtvvmqvkvskgapcripvivadaainkgilvtvnpiastnddevlievnppfgdsy
iivgrgdsrltyqwhke

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6iw0H (H:)
mevqlvesgprlvkpsetlsltctvsggstynhhwswirqppgrglewigyisysgksny
npslksrvtislepsttqfslklnsltaadtavyycareyrddtnyyyysldvwgpgtmv
tvssggggsggggsggggsggggsq

    Sequence, based on observed residues (ATOM records):
    >6iw0H (H:)
evqlvesgprlvkpsetlsltctvsggstynhhwswirqppgrglewigyisysgksnyn
pslksrvtislepsttqfslklnsltaadtavyycareyrddtnyyyysldvwgpgtmvt

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6iw0L (L:)
ivmtqspstlsasvgdrvtitcrasqsigswlawyqqkpgkapklliykasslesgvpsr
fsgsgsgteftltisslqpedfatyycqqynnysytfgpgtkleikr

    Sequence, based on observed residues (ATOM records):
    >6iw0L (L:)
ivmtqspstlsasvgdrvtitcrasqsigswlawyqqkpgkapklliykasslesgvpsr
fsgsgsgteftltisslqpedfatyycqqynnysytfgpgtkleik