PDB entry 6iva

View 6iva on RCSB PDB site
Description: crystal structure of the s. typhimurium oxaloacetate decarboxylase beta-gamma sub-complex
Deposited on 2018-12-03, released 2020-06-24
The last revision was dated 2021-01-13, with a file datestamp of 2021-01-08.
Experiment type: XRAY
Resolution: 4.4 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Oxaloacetate decarboxylase beta chain
    Species: Salmonella enterica I [TaxId:59201]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Probable oxaloacetate decarboxylase gamma chain
    Species: Salmonella enterica I [TaxId:59201]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Oxaloacetate decarboxylase beta chain
    Species: Salmonella enterica I [TaxId:59201]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Probable oxaloacetate decarboxylase gamma chain
    Species: Salmonella enterica I [TaxId:59201]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Oxaloacetate decarboxylase beta chain
    Species: Salmonella enterica I [TaxId:59201]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Probable oxaloacetate decarboxylase gamma chain
    Species: Salmonella enterica I [TaxId:59201]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ivaA (A:)
meslnallqgmglmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeag
maltalesllahhdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytp
gvlalfykvaigsgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltl
nyfglisftlpqaaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppi
mraltsekerkirmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresg
vverlsdtvqnglinivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlm
akllnlcsknkinpligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsa
iaagvmlkyvlam

    Sequence, based on observed residues (ATOM records):
    >6ivaA (A:)
lmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeagmaltalesllah
hdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytpgvlalfykvaig
sgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltlnyfglisftlpq
aaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppimraltsekerki
rmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresgvverlsdtvqng
linivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlmakllnlcsknki
npligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsaiaagvmlkyvla

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ivaB (B:)
mgsshhhhhhssglvprgshmtnaalllgegftlmflgmgfvlaflfllifairgmsaav
nrffpepapapkaapaaaapvvddftrlkpviaaaihhhhrlna

    Sequence, based on observed residues (ATOM records):
    >6ivaB (B:)
tnaalllgegftlmflgmgfvlaflfllifairgmsaavnrf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ivaC (C:)
meslnallqgmglmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeag
maltalesllahhdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytp
gvlalfykvaigsgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltl
nyfglisftlpqaaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppi
mraltsekerkirmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresg
vverlsdtvqnglinivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlm
akllnlcsknkinpligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsa
iaagvmlkyvlam

    Sequence, based on observed residues (ATOM records):
    >6ivaC (C:)
lmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeagmaltalesllah
hdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytpgvlalfykvaig
sgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltlnyfglisftlpq
aaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppimraltsekerki
rmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresgvverlsdtvqng
linivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlmakllnlcsknki
npligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsaiaagvmlkyvla

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ivaD (D:)
mgsshhhhhhssglvprgshmtnaalllgegftlmflgmgfvlaflfllifairgmsaav
nrffpepapapkaapaaaapvvddftrlkpviaaaihhhhrlna

    Sequence, based on observed residues (ATOM records):
    >6ivaD (D:)
tnaalllgegftlmflgmgfvlaflfllifairgmsaavnrf

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ivaE (E:)
meslnallqgmglmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeag
maltalesllahhdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytp
gvlalfykvaigsgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltl
nyfglisftlpqaaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppi
mraltsekerkirmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresg
vverlsdtvqnglinivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlm
akllnlcsknkinpligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsa
iaagvmlkyvlam

    Sequence, based on observed residues (ATOM records):
    >6ivaE (E:)
lmhlgagqaimllvsllllwlaiakkfepllllpigfggllsnipeagmaltalesllah
hdagqlaviaaklncapdvhaikealalalpsvqgqmenlavdmgytpgvlalfykvaig
sgvaplvifmgvgamtdfgpllanprtlllgaaaqfgifatvlgaltlnyfglisftlpq
aaaigiiggadgptaiylsgklapellgaiavaaysymalvpliqppimraltsekerki
rmvqlrtvskrekilfpvvllllvalllpdaapllgmfcfgnlmresgvverlsdtvqng
linivtiflglsvgaklvadkflqpqtlgilllgviafgigtaagvlmakllnlcsknki
npligsagvsavpmaarvsnkvglesdaqnfllmhamgpnvagvigsaiaagvmlkyvla

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ivaF (F:)
mgsshhhhhhssglvprgshmtnaalllgegftlmflgmgfvlaflfllifairgmsaav
nrffpepapapkaapaaaapvvddftrlkpviaaaihhhhrlna

    Sequence, based on observed residues (ATOM records):
    >6ivaF (F:)
tnaalllgegftlmflgmgfvlaflfllifairgmsaavnrf