PDB entry 6itx

View 6itx on RCSB PDB site
Description: structure of the c-terminal head domain of the avian adenovirus edsv fiber
Deposited on 2018-11-26, released 2019-10-09
The last revision was dated 2019-10-09, with a file datestamp of 2019-10-04.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fiber protein
    Species: Duck adenovirus 1 [TaxId:130329]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: fiber protein
    Species: Duck adenovirus 1 [TaxId:130329]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: fiber protein
    Species: Duck adenovirus 1 [TaxId:130329]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: fiber protein
    Species: Duck adenovirus 1 [TaxId:130329]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: fiber protein
    Species: Duck adenovirus 1 [TaxId:130329]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: fiber protein
    Species: Duck adenovirus 1 [TaxId:130329]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GLN, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6itxA (A:)
mgsshhhhhhssglvprgshmasmtggqqmgrgslnvetrggleksdtglkikraaplsi
tsdgeltlaydstdfqvtenglalkvsptqtpltriismgnnlfdsgyeifascpqnkaa
kvagyvyltsvgglvhgtiqikatagywftggnsvqesirfglvlcpfsardptanlsgw
papvvwsgdsntplyfaanaisytnnrvnlavtgnfykeetelpgytrhsfcptgttgmn
ftggnlyvcpctvntgattlnaiymvfvitqsalgtnffasntppntffltppipftyvg
a

    Sequence, based on observed residues (ATOM records):
    >6itxA (A:)
lalkvsptqtpltriismgnnlfdsgyeifascpqnkaakvagyvyltsvgglvhgtiqi
katagywftggnsvqeirfglvlcpfsardptanlsgwpapvvwsgdsntplyfaanais
ytnnrvnlavtgnfykeetelpgytrhsfcptgttgmnftggnlyvcpctvntgattlna
iymvfvitqsalgtnffasntppntffltppipftyvga

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6itxB (B:)
mgsshhhhhhssglvprgshmasmtggqqmgrgslnvetrggleksdtglkikraaplsi
tsdgeltlaydstdfqvtenglalkvsptqtpltriismgnnlfdsgyeifascpqnkaa
kvagyvyltsvgglvhgtiqikatagywftggnsvqesirfglvlcpfsardptanlsgw
papvvwsgdsntplyfaanaisytnnrvnlavtgnfykeetelpgytrhsfcptgttgmn
ftggnlyvcpctvntgattlnaiymvfvitqsalgtnffasntppntffltppipftyvg
a

    Sequence, based on observed residues (ATOM records):
    >6itxB (B:)
vsptqtpltriismgnnlfdsgyeifascpqnkaakvagyvyltsvgglvhgtiqikata
gywftggnsvqesirfglvlcpfsardptanlsgwpapvvwsgdsntplyfaanaisytn
nrvnlavtgnfykeetelpgytrhsfcptgttgmnftggnlyvcpctvntgattlnaiym
vfvitqsalgtnffasntppntffltppipftyvga

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6itxC (C:)
mgsshhhhhhssglvprgshmasmtggqqmgrgslnvetrggleksdtglkikraaplsi
tsdgeltlaydstdfqvtenglalkvsptqtpltriismgnnlfdsgyeifascpqnkaa
kvagyvyltsvgglvhgtiqikatagywftggnsvqesirfglvlcpfsardptanlsgw
papvvwsgdsntplyfaanaisytnnrvnlavtgnfykeetelpgytrhsfcptgttgmn
ftggnlyvcpctvntgattlnaiymvfvitqsalgtnffasntppntffltppipftyvg
a

    Sequence, based on observed residues (ATOM records):
    >6itxC (C:)
kvsptqtpltriismgnnlfdsgyeifascpqnkaakvagyvyltsvgglvhgtiqikat
agywftggnsvqesirfglvlcpfsardptanlsgwpapvvwsgdsntplyfaanaisyt
nnrvnlavtgnfykeetelpgytrhsfcptgttgmnftggnlyvcpctvntgattlnaiy
mvfvitqsalgtnffasntppntffltppipftyvga

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6itxD (D:)
mgsshhhhhhssglvprgshmasmtggqqmgrgslnvetrggleksdtglkikraaplsi
tsdgeltlaydstdfqvtenglalkvsptqtpltriismgnnlfdsgyeifascpqnkaa
kvagyvyltsvgglvhgtiqikatagywftggnsvqesirfglvlcpfsardptanlsgw
papvvwsgdsntplyfaanaisytnnrvnlavtgnfykeetelpgytrhsfcptgttgmn
ftggnlyvcpctvntgattlnaiymvfvitqsalgtnffasntppntffltppipftyvg
a

    Sequence, based on observed residues (ATOM records):
    >6itxD (D:)
tenglalkvsptqtpltriismgnnlfdsgyeifascpqnkaakvagyvyltsvgglvhg
tiqikatagywftggnsvqesirfglvlcpfsardptanlsgwpapvvwgdsntplyfaa
naisytnnrvnlavtgnfykeetelpgytrhsfcptgttgmnftggnlyvcpctvntgat
tlnaiymvfvitqsalgtnffasntppntffltppipftyvga

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6itxE (E:)
mgsshhhhhhssglvprgshmasmtggqqmgrgslnvetrggleksdtglkikraaplsi
tsdgeltlaydstdfqvtenglalkvsptqtpltriismgnnlfdsgyeifascpqnkaa
kvagyvyltsvgglvhgtiqikatagywftggnsvqesirfglvlcpfsardptanlsgw
papvvwsgdsntplyfaanaisytnnrvnlavtgnfykeetelpgytrhsfcptgttgmn
ftggnlyvcpctvntgattlnaiymvfvitqsalgtnffasntppntffltppipftyvg
a

    Sequence, based on observed residues (ATOM records):
    >6itxE (E:)
kvsptqtpltriismgnnlfdsgyeifascpqnkaakvagyvyltsvgglvhgtiqikat
agywftggnsvqesirfglvlcpfsardptanlsgwpapvvwsgdsntplyfaanaisyt
nnrvnlavtgnfykeetelpgytrhsfcptgttgmnftggnlyvcpctvntgattlnaiy
mvfvitqsalgtnffasntppntffltppipftyvga

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6itxF (F:)
mgsshhhhhhssglvprgshmasmtggqqmgrgslnvetrggleksdtglkikraaplsi
tsdgeltlaydstdfqvtenglalkvsptqtpltriismgnnlfdsgyeifascpqnkaa
kvagyvyltsvgglvhgtiqikatagywftggnsvqesirfglvlcpfsardptanlsgw
papvvwsgdsntplyfaanaisytnnrvnlavtgnfykeetelpgytrhsfcptgttgmn
ftggnlyvcpctvntgattlnaiymvfvitqsalgtnffasntppntffltppipftyvg
a

    Sequence, based on observed residues (ATOM records):
    >6itxF (F:)
glalkvsptqtpltriismgnnlfdsgyeifascpqnkaakvagyvyltsvgglvhgtiq
ikatagywftggnsvqesirfglvlcpfsardptanlsgwpapvvwsgdsntplyfaana
isytnnrvnlavtgnfykeetelpgytrhsfcptgttgmnftggnlyvcpctvntgattl
naiymvfvitqsalgtnffasntppntffltppipftyvga