PDB entry 6itk

View 6itk on RCSB PDB site
Description: Crystal structure of malate dehydrogenase from Corynebacterium glutamicum ATCC 13032 in complex with NAD and malate
Class: oxidoreductase
Keywords: dehydrogenase, OXIDOREDUCTASE
Deposited on 2018-11-23, released 2019-11-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: malate dehydrogenase
    Species: Corynebacterium glutamicum ATCC 13032 [TaxId:196627]
    Gene: mdh, Cgl2380, cg2613
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NN33 (Start-327)
      • expression tag (328-329)
    Domains in SCOPe 2.08: d6itka1, d6itka2, d6itka3
  • Chain 'B':
    Compound: malate dehydrogenase
    Species: Corynebacterium glutamicum ATCC 13032 [TaxId:196627]
    Gene: mdh, Cgl2380, cg2613
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NN33 (Start-327)
      • expression tag (328-329)
    Domains in SCOPe 2.08: d6itkb1, d6itkb2, d6itkb3
  • Heterogens: LMR, NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6itkA (A:)
mnspqnvstkkvtvtgaagqisysllwriangevfgtdtpvelklleipqalggaegvam
elldsafpllrnititadaneafdganaaflvgakprgkgeeradllanngkifgpqgka
indnaaddirvlvvgnpantnaliasaaapdvpasrfnammrldhnraisqlatklgrgs
aefnnivvwgnhsatqfpdityatvggekvtdlvdhdwyveefiprvanrgaeiievrgk
ssaasaassaidhmrdwvqgteawssaaipstgaygipegifvglptvsrngeweivegl
eisdfqraridanaqelqaereavrdlllehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6itkA (A:)
stkkvtvtgaagqisysllwriangevfgtdtpvelklleipqalggaegvamelldsaf
pllrnititadaneafdganaaflvgakperadllanngkifgpqgkaindnaaddirvl
vvgnpantnaliasaaapdvpasrfnammrldhnraisqlatklgrgsaefnnivvwgnh
satqfpdityatvggekvtdlvdhdwyveefiprvanrgaeiievrgkssaasaassaid
hmrdwvqgteawssaaipstgaygipegifvglptvsrngeweivegleisdfqrarida
naqelqaereavrdllle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6itkB (B:)
mnspqnvstkkvtvtgaagqisysllwriangevfgtdtpvelklleipqalggaegvam
elldsafpllrnititadaneafdganaaflvgakprgkgeeradllanngkifgpqgka
indnaaddirvlvvgnpantnaliasaaapdvpasrfnammrldhnraisqlatklgrgs
aefnnivvwgnhsatqfpdityatvggekvtdlvdhdwyveefiprvanrgaeiievrgk
ssaasaassaidhmrdwvqgteawssaaipstgaygipegifvglptvsrngeweivegl
eisdfqraridanaqelqaereavrdlllehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6itkB (B:)
stkkvtvtgaagqisysllwriangevfgtdtpvelklleipqalggaegvamelldsaf
pllrnititadaneafdganaaflvgakperadllanngkifgpqgkaindnaaddirvl
vvgnpantnaliasaaapdvpasrfnammrldhnraisqlatklgrgsaefnnivvwgnh
satqfpdityatvggekvtdlvdhdwyveefiprvanrgaeiievrgkssaasaassaid
hmrdwvqgteawssaaipstgaygipegifvglptvsrngeweivegleisdfqrarida
naqelqaereavrdllle