PDB entry 6irz

View 6irz on RCSB PDB site
Description: crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to sah and m7g-capped rna
Deposited on 2018-11-15, released 2018-12-05
The last revision was dated 2020-10-28, with a file datestamp of 2020-10-23.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PDX1 C-terminal-inhibiting factor 1
    Species: Danio rerio [TaxId:7955]
    Gene: pcif1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0R4IKJ1 (0-495)
      • engineered mutation (130)
      • engineered mutation (166)
  • Heterogens: SAH, EDO, M7G, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6irzA (A:)
vywdldiqtnavirerapadhlpphpeielqraqlttklrqhyhelcsqregieppresf
nrwllerkvvdkgldpllpsecdpvispsmfreimndipirlsrikykeearkllfkyae
aakkmidsrnvtpesrkvvkwnvedtmnwlrrdhsaskedymdrlenlrkqcgphvasva
kdsvegicskiyhisaeyvrrirqahltllkecnisvdgtesaevqdrlvycypvrlsip
appqtrvelhfendiaclrfkgemvkvsrghfnklellyrysciddprfekflsrvwcli
kryqvmfgsgvnegsglqgslpvpvfealnkqfgvtfecfasplncyfkqfcsafpdidg
ffgsrgpflsfspasgsfeanppfceelmdamvthfedllgrsseplsfiifvpewrdpp
tpaltrmeasrfrrhqmtvpafeheyrsgsqhickreeiyykaihgtaviflqnnagfak
weptteriqellaayk

    Sequence, based on observed residues (ATOM records):
    >6irzA (A:)
vywdldiqtnavirerapadhlpphpeielqraqlttklrqhyhelcsqregieppresf
nrwllerkvvdkgldpllpsecdpvispsmfreimndipirlsrikykeearkllfkyae
aakkmidsrnvtpesrkvvkwnvedtmnwlrrdhsaskedymdrlenlrkqcgphvasva
kdsvegicskiyhisaeyvrrirqahltllkecnisvdvqdrlvycypvrlsipappqtr
velhfendiaclrfkgemvkvsrghfnklellyrysciddprfekflsrvwclikryqvm
fgsglqgslpvpvfealnkqfgvtfecfasplncyfkqfcsafpdidgffgsrgpflsfs
pasgsfeanppfceelmdamvthfedllgrsseplsfiifvpewrdpptpaltrmeasrf
rrhqmtvpafeheyrhgtaviflqnnagfakweptteriqellaayk