PDB entry 6iqq

View 6iqq on RCSB PDB site
Description: Crystal structure of Prc with S452I and L252Y mutations in complex with NlpI
Class: hydrolase
Keywords: protein quality control, peptidoglycan remodeling, HYDROLASE
Deposited on 2018-11-08, released 2019-07-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-09-25, with a file datestamp of 2019-09-20.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lipoprotein nlpI
    Species: Escherichia coli [TaxId:83333]
    Gene: nlpI, yhbM, b3163, JW3132
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iqqa_
  • Chain 'B':
    Compound: Lipoprotein nlpI
    Species: Escherichia coli [TaxId:83333]
    Gene: nlpI, yhbM, b3163, JW3132
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iqqb_
  • Chain 'C':
    Compound: Tail-specific protease
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: prc, tsp, b1830, JW1819
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23865
      • engineered mutation (251)
      • engineered mutation (451)
  • Chain 'D':
    Compound: Tail-specific protease
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: prc, tsp, b1830, JW1819
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23865
      • engineered mutation (251)
      • engineered mutation (451)
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6iqqA (A:)
mgsshhhhhhssglvprgshmsntswrksevlavplqptlqqevilarmeqilasraltd
deraqllyergvlydslglralarndfsqalairpdmpevfnylgiyltqagnfdaayea
fdsvleldptynyahlnrgialyyggrdklaqddllafyqddpndpfrslwlylaeqkld
ekqakevlkqhfeksdkeqwgwnivefylgniseqtlmerlkadatdntslaehlsetnf
ylgkyylslgdldsatalfklavannvhnfvehryallelsllgqdqddlaesdqq

    Sequence, based on observed residues (ATOM records): (download) 
    >6iqqA (A:)
vlavplqptlqqevilarmeqilasraltdderaqllyergvlydslglralarndfsqa
lairpdmpevfnylgiyltqagnfdaayeafdsvleldptynyahlnrgialyyggrdkl
aqddllafyqddpndpfrslwlylaeqkldekqakevlkqhfeksdkeqwgwnivefylg
niseqtlmerlkadatdntslaehlsetnfylgkyylslgdldsatalfklavannvhnf
vehryallelsllgqdq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6iqqB (B:)
mgsshhhhhhssglvprgshmsntswrksevlavplqptlqqevilarmeqilasraltd
deraqllyergvlydslglralarndfsqalairpdmpevfnylgiyltqagnfdaayea
fdsvleldptynyahlnrgialyyggrdklaqddllafyqddpndpfrslwlylaeqkld
ekqakevlkqhfeksdkeqwgwnivefylgniseqtlmerlkadatdntslaehlsetnf
ylgkyylslgdldsatalfklavannvhnfvehryallelsllgqdqddlaesdqq

    Sequence, based on observed residues (ATOM records): (download) 
    >6iqqB (B:)
evlavplqptlqqevilarmeqilasraltdderaqllyergvlydslglralarndfsq
alairpdmpevfnylgiyltqagnfdaayeafdsvleldptynyahlnrgialyyggrdk
laqddllafyqddpndpfrslwlylaeqkldekqakevlkqhfeksdkeqwgwnivefyl
gniseqtlmerlkadatdntslaehlsetnfylgkyylslgdldsatalfklavannvhn
fvehryallelsllgqdq

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.