PDB entry 6ip2

View 6ip2 on RCSB PDB site
Description: nsf-d1d2 part in the whole 20s complex
Deposited on 2018-11-01, released 2019-04-24
The last revision was dated 2019-11-06, with a file datestamp of 2019-11-01.
Experiment type: EM
Resolution: 3.7 Å
R-factor: N/A
AEROSPACI score: 0.08 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vesicle-fusing ATPase
    Species: Cricetulus griseus [TaxId:10029]
    Gene: NSF
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Vesicle-fusing ATPase
    Species: Cricetulus griseus [TaxId:10029]
    Gene: NSF
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Vesicle-fusing ATPase
    Species: Cricetulus griseus [TaxId:10029]
    Gene: NSF
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Vesicle-fusing ATPase
    Species: Cricetulus griseus [TaxId:10029]
    Gene: NSF
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Vesicle-fusing ATPase
    Species: Cricetulus griseus [TaxId:10029]
    Gene: NSF
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Vesicle-fusing ATPase
    Species: Cricetulus griseus [TaxId:10029]
    Gene: NSF
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ATP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ip2A (A:)
mrgshhhhhhtdpldvdsepdvsakmagrsmqaarcptdelslsncavvsekdyqsgqhv
ivrtspnhkyiftlrthpsvvpgsvafslpqrkwaglsigqeievalysfdkakqcigtm
tieidflqkknidsnpydtdkmaaefiqqfnnqafsvgqqlvfsfndklfgllvkdieav
dpsilkgepasgkrqkievglvvgnsqvafekaensslnligkaktkenrqsiinpdwnf
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallreegaspldfd

    Sequence, based on observed residues (ATOM records):
    >6ip2A (A:)
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallre

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ip2B (B:)
mrgshhhhhhtdpldvdsepdvsakmagrsmqaarcptdelslsncavvsekdyqsgqhv
ivrtspnhkyiftlrthpsvvpgsvafslpqrkwaglsigqeievalysfdkakqcigtm
tieidflqkknidsnpydtdkmaaefiqqfnnqafsvgqqlvfsfndklfgllvkdieav
dpsilkgepasgkrqkievglvvgnsqvafekaensslnligkaktkenrqsiinpdwnf
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallreegaspldfd

    Sequence, based on observed residues (ATOM records):
    >6ip2B (B:)
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallre

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ip2C (C:)
mrgshhhhhhtdpldvdsepdvsakmagrsmqaarcptdelslsncavvsekdyqsgqhv
ivrtspnhkyiftlrthpsvvpgsvafslpqrkwaglsigqeievalysfdkakqcigtm
tieidflqkknidsnpydtdkmaaefiqqfnnqafsvgqqlvfsfndklfgllvkdieav
dpsilkgepasgkrqkievglvvgnsqvafekaensslnligkaktkenrqsiinpdwnf
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallreegaspldfd

    Sequence, based on observed residues (ATOM records):
    >6ip2C (C:)
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallre

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ip2D (D:)
mrgshhhhhhtdpldvdsepdvsakmagrsmqaarcptdelslsncavvsekdyqsgqhv
ivrtspnhkyiftlrthpsvvpgsvafslpqrkwaglsigqeievalysfdkakqcigtm
tieidflqkknidsnpydtdkmaaefiqqfnnqafsvgqqlvfsfndklfgllvkdieav
dpsilkgepasgkrqkievglvvgnsqvafekaensslnligkaktkenrqsiinpdwnf
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallreegaspldfd

    Sequence, based on observed residues (ATOM records):
    >6ip2D (D:)
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallre

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ip2E (E:)
mrgshhhhhhtdpldvdsepdvsakmagrsmqaarcptdelslsncavvsekdyqsgqhv
ivrtspnhkyiftlrthpsvvpgsvafslpqrkwaglsigqeievalysfdkakqcigtm
tieidflqkknidsnpydtdkmaaefiqqfnnqafsvgqqlvfsfndklfgllvkdieav
dpsilkgepasgkrqkievglvvgnsqvafekaensslnligkaktkenrqsiinpdwnf
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallreegaspldfd

    Sequence, based on observed residues (ATOM records):
    >6ip2E (E:)
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallre

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ip2F (F:)
mrgshhhhhhtdpldvdsepdvsakmagrsmqaarcptdelslsncavvsekdyqsgqhv
ivrtspnhkyiftlrthpsvvpgsvafslpqrkwaglsigqeievalysfdkakqcigtm
tieidflqkknidsnpydtdkmaaefiqqfnnqafsvgqqlvfsfndklfgllvkdieav
dpsilkgepasgkrqkievglvvgnsqvafekaensslnligkaktkenrqsiinpdwnf
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallreegaspldfd

    Sequence, based on observed residues (ATOM records):
    >6ip2F (F:)
ekmgiggldkefsdifrrafasrvfppeiveqmgckhvkgillygppgcgktllarqigk
mlnarepkvvngpeilnkyvgeseanirklfadaeeeqrrlgansglhiiifdeidaick
qrgsmagstgvhdtvvnqllskidgveqlnnilvigmtnrpdlideallrpgrlevkmei
glpdekgrlqilhihtarmrghqllsadvdikelavetknfsgaeleglvraaqstamnr
hikastkvevdmekaeslqvtrgdflaslendikpafgtnqedyasyimngiikwgdpvt
rvlddgellvqqtknsdrtplvsvllegpphsgktalaakiaeesnfpfikicspdkmig
fsetakcqamkkifddayksqlscvvvddierlldyvpigprfsnlvlqallvllkkapp
qgrklliigttsrkdvlqememlnafsttihvpniatgeqllealellgnfkdkerttia
qqvkgkkvwigikkllmliemslqmdpeyrvrkflallre