PDB entry 6ion

View 6ion on RCSB PDB site
Description: The complex of C4.4A with its antibody 11H10 Fab fragment
Class: immune system
Keywords: uPAR, three-fingered fold, LU domain, IMMUNE SYSTEM
Deposited on 2018-10-30, released 2020-01-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-02.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ly6/PLAUR domain-containing protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: C4.4A
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: anti-C4.4A antibody 11H10, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ION
    Domains in SCOPe 2.08: d6ionh_
  • Chain 'L':
    Compound: anti-C4.4A antibody 11H10, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ION
    Domains in SCOPe 2.08: d6ionl1, d6ionl2
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6ionH (H:)
qvtlkesgpgilqpsqtlsltcsfsgfslnsfgtgvgwirqpsgkglewlahiwwndyky
ynaalesrltiskdtsnnqvflkiasvdtadtatyycarlrlryfdywgqgttltvssak
ttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdly
tlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdc

    Sequence, based on observed residues (ATOM records): (download) 
    >6ionH (H:)
vtlkesgpgilqpsqtlsltcsfsgfslnsfgtgvgwirqpsgkglewlahiwwndykyy
naalesrltiskdtsnnqvflkiasvdtadtatyycarlrlryfdywgqgttltvssakt
tppsvyplapmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvp
sstwpsetvtcnvahpasstkvdkkivp

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6ionL (L:)
dilmtqspailsvspgegvsfscwanqnigtsihwyqqrtngsprllikyasesisgips
rfsgsgsgtdftlsinsvesediadyycqqsnswpiftfgsgtkleikradaaptvsifp
psseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstl
tltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records): (download) 
    >6ionL (L:)
ilmtqspailsvspgegvsfscwanqnigtsihwyqqrtngsprllikyasesisgipsr
fsgsgsgtdftlsinsvesediadyycqqsnswpiftfgsgtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrne