PDB entry 6im5

View 6im5 on RCSB PDB site
Description: YAP-binding domain of human TEAD1
Class: transcription
Keywords: TEAD1, YAP-binding domain, Hippo pathway, Transcription factor, TRANSCRIPTION
Deposited on 2018-10-22, released 2019-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-30, with a file datestamp of 2019-10-25.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcriptional enhancer factor TEF-1
    Species: Homo sapiens [TaxId:9606]
    Gene: TEAD1, TCF13, TEF1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28347 (Start-232)
      • expression tag (1-6)
    Domains in SCOPe 2.08: d6im5a1
  • Chain 'B':
    Compound: Transcriptional enhancer factor TEF-1
    Species: Homo sapiens [TaxId:9606]
    Gene: TEAD1, TCF13, TEF1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P28347 (Start-232)
      • expression tag (1-6)
    Domains in SCOPe 2.08: d6im5b1
  • Heterogens: PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6im5A (A:)
gshmasmtggqqmgrgsigttklrlvefsafleqqrdpdsynkhlfvhighanhsysdpl
lesvdirqiydkfpekkgglkelfgkgpqnafflvkfwadlncniqddagafygvtsqye
ssenmtvtcstkvcsfgkqvvekveteyarfengrfvyrinrspmceyminfihklkhlp
ekymmnsvlenftillvvtnrdtqetllcmacvfevsnsehgaqhhiyrlvkd

    Sequence, based on observed residues (ATOM records): (download) 
    >6im5A (A:)
shmasmigttklrlvefsafleqqrdpdsynkhlfvhighdpllesvdirqiydkfpekk
gglkelfgkgpqnafflvkfwadlncniqddagafygvtsqyessenmtvtcstkvcsfg
kqvvekveteyarfengrfvyrinrspmceyminfihklkhlpekymmnsvlenftillv
vtnrdtqetllcmacvfevsnsehgaqhhiyrlvkd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6im5B (B:)
gshmasmtggqqmgrgsigttklrlvefsafleqqrdpdsynkhlfvhighanhsysdpl
lesvdirqiydkfpekkgglkelfgkgpqnafflvkfwadlncniqddagafygvtsqye
ssenmtvtcstkvcsfgkqvvekveteyarfengrfvyrinrspmceyminfihklkhlp
ekymmnsvlenftillvvtnrdtqetllcmacvfevsnsehgaqhhiyrlvkd

    Sequence, based on observed residues (ATOM records): (download) 
    >6im5B (B:)
shmasmigttklrlvefsafleqqrdpdsynkhlfvhighdpllesvdirqiydkfpekk
gglkelfgkgpqnafflvkfwadlncniqddagafygvtsqyessenmtvtcstkvcsfg
kqvvekveteyarfengrfvyrinrspmceyminfihklkhlpekymmnsvlenftillv
vtnrdtqetllcmacvfevsnsehgaqhhiyrlvkd