PDB entry 6ils

View 6ils on RCSB PDB site
Description: Structure of Arabidopsis thaliana Ribokinase complexed with Ribose and ATP
Class: transferase
Keywords: Ribose, Ribokinase, AtRBSK, PfkB family, Phosphotransferase, TRANSFERASE
Deposited on 2018-10-19, released 2019-03-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-02.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribokinase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At1g17160, F20D23.14, F20D23_14
    Database cross-references and differences (RAF-indexed):
    • Uniprot A1A6H3 (1-End)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d6ilsa_
  • Chain 'B':
    Compound: ribokinase
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At1g17160, F20D23.14, F20D23_14
    Database cross-references and differences (RAF-indexed):
    • Uniprot A1A6H3 (1-312)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d6ilsb_
  • Heterogens: ATP, NA, RIB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ilsA (A:)
mapplvvvgsanadiyveierlpkegetisaktgqtlaggkganqaacgaklmyptyfvg
rlgedahgkliaealgddgcgvhldyvrsvnneptghavvmlqsdgqnsiiivgganmka
wpeimsdddleivrnagivllqreipdsiniqvakavkkagvpvildvggmdtpipnell
dsidilspnetelsrltgmptetfeqisqavakchklgvkqvlvklgskgsalfiqgekp
iqqsiipaaqvvdttgagdtftaafavamvegksheeclrfaaaaaslcvqvkgaipsmp
drksvlkllkfsi

    Sequence, based on observed residues (ATOM records): (download) 
    >6ilsA (A:)
mapplvvvgsanadiyveierlpkegetisaktgqtlaggkganqaacgaklmyptyfvg
rlgedahgkliaealgddgcgvhldyvrsvnneptghavvmlqsdgqnsiiivgganmka
wpeimsdddleivrnagivllqreipdsiniqvakavkkagvpvildvggmdtpipnell
dsidilspnetelsrltgmptetfeqisqavakchklgvkqvlvklgskgsalfiqgekp
iqqsiipaaqvvdttgagdtftaafavamvegksheeclrfaaaaaslcvqvkgaipsmp
drksvlkllkfs

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ilsB (B:)
mapplvvvgsanadiyveierlpkegetisaktgqtlaggkganqaacgaklmyptyfvg
rlgedahgkliaealgddgcgvhldyvrsvnneptghavvmlqsdgqnsiiivgganmka
wpeimsdddleivrnagivllqreipdsiniqvakavkkagvpvildvggmdtpipnell
dsidilspnetelsrltgmptetfeqisqavakchklgvkqvlvklgskgsalfiqgekp
iqqsiipaaqvvdttgagdtftaafavamvegksheeclrfaaaaaslcvqvkgaipsmp
drksvlkllkfsi