PDB entry 6ilp

View 6ilp on RCSB PDB site
Description: Cryo-EM structure of full Echovirus 6 particle at PH 7.4
Class: virus
Keywords: Echovirus 6, Cryo-EM, VIRUS
Deposited on 2018-10-19, released 2019-05-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-06-12, with a file datestamp of 2019-06-07.
Experiment type: EM
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid protein VP1
    Species: Echovirus E6 [TaxId:12062]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ILP (0-274)
    Domains in SCOPe 2.08: d6ilpa_
  • Chain 'B':
    Compound: capsid protein VP2
    Species: Echovirus E6 [TaxId:12062]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ILP (0-251)
  • Chain 'C':
    Compound: capsid protein vp3
    Species: Echovirus E6 [TaxId:12062]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ILP (0-237)
    Domains in SCOPe 2.08: d6ilpc_
  • Chain 'D':
    Compound: capsid protein VP4
    Species: Echovirus E6 [TaxId:12062]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ILP (0-67)
  • Heterogens: SPH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ilpA (A:)
vvrvadtmpsgpsnsesipaltaaetghtsqvvpsdtiqtrhvrnfhvrsessvenflsr
sacvyiveyktrddtpdkmydswvintrqvaqlrrklefftyvrfdvevtfvitsvqdds
trqntdtpalthqimyvppggpipqavddynwqtstnpsvfwtegnapprmsipfmsvgn
aysnfydgwshfsqtgvygfntlnnmgklyfrhvndktispitskvriyfkpkhvkawvp
rpprlceythkdnvdfepkgvttsrtqltisnsth

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ilpC (C:)
glpvmntpgsnqfltsddyqsptampqfdvtpemnipgevknlmeiaevdsvvpvnnvne
nvnsleayripvhsvtetgaqvfgftlqpgadtvmertllgeilnyyanwsgsikltfmy
cgsamatgkfllaysppgagvpknrreamlgthiiwdiglqsscvlcvpwisqthyrfvs
kdiytdagfitcwyqtsivvpaevqnqsvilcfvsacndfsvrllrdspfvrqtafyq

  • Chain 'D':
    No sequence available.