PDB entry 6ild

View 6ild on RCSB PDB site
Description: Crystal Structure of Human LysRS: P38/AIMP2 Complex II
Class: ligase
Keywords: lysyl-tRNA synthetase, LysRS, P38, AIMP2, multi tRNA synthetase complex sub-complex, LIGASE
Deposited on 2018-10-17, released 2019-02-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-10, with a file datestamp of 2019-04-05.
Experiment type: XRAY
Resolution: 1.88 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lysine--tRNA ligase
    Species: Homo sapiens [TaxId:9606]
    Gene: KARS, KIAA0070
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ilda1, d6ilda2
  • Chain 'B':
    Compound: Lysine--tRNA ligase
    Species: Homo sapiens [TaxId:9606]
    Gene: KARS, KIAA0070
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ildb1, d6ildb2
  • Chain 'C':
    Compound: Aminoacyl tRNA synthase complex-interacting multifunctional protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: AIMP2
    Database cross-references and differences (RAF-indexed):
  • Heterogens: LYS, GOL, MG, 45A, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ildA (A:)
msvdpnqyykirsqaihqlkvngedpyphkfhvdisltdfiqkyshlqpgdhltditlkv
agrihakrasggklifydlrgegvklqvmansrnykseeefihinnklrrgdiigvqgnp
gktkkgelsiipyeitllspclhmlphlhfglkdketryrqryldlilndfvrqkfiirs
kiityirsfldelgfleietpmmniipggavakpfityhneldmnlymriapelyhkmlv
vggidrvyeigrqfrnegidlthnpefttcefymayadyhdlmeitekmvsgmvkhitgs
ykvtyhpdgpegqaydvdftppfrrinmveelekalgmklpetnlfeteetrkilddicv
akavecppprttarlldklvgeflevtcinptficdhpqimsplakwhrskeglterfel
fvmkkeicnaytelndpmrqrqlfeeqakakaagddeamfidenfctaleyglpptagwg
mgidrvamfltdsnnikevllfpamkpedkken

    Sequence, based on observed residues (ATOM records): (download) 
    >6ildA (A:)
dpnqyykirsqaihqlkvngedpyphkfhvdisltdfiqkyshlqpgdhltditlkvagr
ihakrasggklifydlrgegvklqvmansrnykseeefihinnklrrgdiigvqgnpgkt
kkgelsiipyeitllspclhmlphlkdketryrqryldlilndfvrqkfiirskiityir
sfldelgfleietpmmniipggavakpfityhneldmnlymriapelyhkmlvvggidrv
yeigrqfrnegidlthnpefttcefymayadyhdlmeitekmvsgmvkhitgsykvtyhp
dgpegqaydvdftppfrrinmveelekalgmklpetnlfeteetrkilddicvakavecp
pprttarlldklvgeflevtcinptficdhpqimsplakwhrskeglterfelfvmkkei
cnaytelndpmrqrqlfeeqakakaagddeamfidenfctaleyglpptagwgmgidrva
mfltdsnnikevllfpamkpe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6ildB (B:)
msvdpnqyykirsqaihqlkvngedpyphkfhvdisltdfiqkyshlqpgdhltditlkv
agrihakrasggklifydlrgegvklqvmansrnykseeefihinnklrrgdiigvqgnp
gktkkgelsiipyeitllspclhmlphlhfglkdketryrqryldlilndfvrqkfiirs
kiityirsfldelgfleietpmmniipggavakpfityhneldmnlymriapelyhkmlv
vggidrvyeigrqfrnegidlthnpefttcefymayadyhdlmeitekmvsgmvkhitgs
ykvtyhpdgpegqaydvdftppfrrinmveelekalgmklpetnlfeteetrkilddicv
akavecppprttarlldklvgeflevtcinptficdhpqimsplakwhrskeglterfel
fvmkkeicnaytelndpmrqrqlfeeqakakaagddeamfidenfctaleyglpptagwg
mgidrvamfltdsnnikevllfpamkpedkken

    Sequence, based on observed residues (ATOM records): (download) 
    >6ildB (B:)
dpnqyykirsqaihqlkvngedpyphkfhvdisltdfiqkyshlqpgdhltditlkvagr
ihakrasggklifydlrgegvklqvmansrnykseeefihinnklrrgdiigvqgnpgkt
kkgelsiipyeitllspclhmlphldketryrqryldlilndfvrqkfiirskiityirs
fldelgfleietpmmniipggavakpfityhneldmnlymriapelyhkmlvvggidrvy
eigrqfrnegidlthnpefttcefymayadyhdlmeitekmvsgmvkhitgsykvtyhpd
gpegqaydvdftppfrrinmveelekalgmklpetnlfeteetrkilddicvakavecpp
prttarlldklvgeflevtcinptficdhpqimsplakwhrskeglterfelfvmkkeic
naytelndpmrqrqlfeeqakakaagddeamfidenfctaleyglpptagwgmgidrvam
fltdsnnikevllfpamkp

  • Chain 'C':
    No sequence available.