PDB entry 6ijr

View 6ijr on RCSB PDB site
Description: human ppargamma ligand binding domain complexed with sb1495
Deposited on 2018-10-11, released 2019-10-16
The last revision was dated 2019-10-16, with a file datestamp of 2019-10-11.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 16 mer peptide from Nuclear receptor coactivator 1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: Homo sapiens [TaxId:9606]
    Gene: PPARG, NR1C3
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 16 mer peptide from Nuclear receptor coactivator 1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: A9C, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ijrA (A:)
aeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmns
lmmgedkikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndq
vtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkf
nalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfak
llqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly

    Sequence, based on observed residues (ATOM records):
    >6ijrA (A:)
issdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslm
mgedkikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvt
llkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfna
lelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakll
qkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ijrB (B:)
erhkilhrllqegsps

    Sequence, based on observed residues (ATOM records):
    >6ijrB (B:)
hkilhrllq

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6ijrC (C:)
aeissdidqlnpesadlralakhlydsyiksfpltkakarailtgkttdkspfviydmns
lmmgedkikfkhitplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndq
vtllkygvheiiytmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkf
nalelddsdlaifiaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfak
llqkmtdlrqivtehvqllqvikktetdmslhpllqeiykdly

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ijrD (D:)
erhkilhrllqegsps

    Sequence, based on observed residues (ATOM records):
    >6ijrD (D:)
hkilhrllqe