PDB entry 6ijm

View 6ijm on RCSB PDB site
Description: Apo structure of the N6-methyl-AMP Deaminase from Arabidopsis thaliana
Class: hydrolase
Keywords: Purine metabolism, deaminase, N6-methyladensosine, Tim-barrel, inosine, epigenetics, HYDROLASE
Deposited on 2018-10-10, released 2019-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-17, with a file datestamp of 2019-04-12.
Experiment type: XRAY
Resolution: 2.02 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenosine/AMP deaminase family protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At4g04880, T4B21.20, T4B21_20
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8LPL7 (21-End)
      • expression tag (20)
    Domains in SCOPe 2.08: d6ijma1, d6ijma2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ijmA (A:)
mgsshhhhhhhhlevlfqgphmewiqslpkielhahlngsirdstllelarvlgekgviv
fadvehviqkndrslvevfklfdlihklttdhktvtritrevvedfalenvvylelrttp
krsdsigmskrsymeaviqglrsvsevdidfvtasdsqklhnagdgigrkkiyvrlllsi
drrettesametvklalemrdvgvvgidlsgnplvgewstflpalqyakdndlhitlhcg
evpnpkeiqamldfkphrighacffkdedwtklksfripveicltsnivtksissidihh
fadlynakhplilctddfgvfstslsneyalavrslglsksetfalaraaidatfaedev
kqqlrfifdsaspehv

    Sequence, based on observed residues (ATOM records): (download) 
    >6ijmA (A:)
hmewiqslpkielhahlngsirdstllelarvlgekgvivfadvehviqrslvevfklfd
lihklttdhktvtritrevvedfalenvvylelrttpkrsdsigmskrsymeaviqglrs
vsevdidfvtrkkiyvrlllsidrrettesametvklalemrdvgvvgidlsgnplvgew
stflpalqyakdndlhitlhcgevpnpkeiqamldfkphrighacffkdedwtklksfri
pveicltsnivtksissidihhfadlynakhplilctddfgvfstslsneyalavrslgl
sksetfalaraaidatfaedevkqqlrfifdsaspeh