PDB entry 6ijf

View 6ijf on RCSB PDB site
Description: crystal structure of the type vi effector-immunity complex (tae4-tai4) from agrobacterium tumefaciens
Deposited on 2018-10-09, released 2018-12-19
The last revision was dated 2018-12-19, with a file datestamp of 2018-12-14.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tai4
    Species: Agrobacterium tumefaciens [TaxId:358]
    Gene: SY94_4314
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Tai4
    Species: Agrobacterium tumefaciens [TaxId:358]
    Gene: SY94_4314
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Tae4
    Species: Agrobacterium tumefaciens [TaxId:358]
    Gene: SY94_4315
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Tae4
    Species: Agrobacterium tumefaciens [TaxId:358]
    Gene: SY94_4315
    Database cross-references and differences (RAF-indexed):
  • Heterogens: 1PE, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ijfA (A:)
gdpaertwifsgaelkqaiegklapdvsdpemrrlvsvakssayiagvadltsgsdwcga
gavapheltdriytylgdmpaekldeqaatlvrealkvsfpceqksn

    Sequence, based on observed residues (ATOM records):
    >6ijfA (A:)
paertwifsgaelkqaiegklapdvsdpemrrlvsvakssayiagvadltsgsdwcgaga
vapheltdriytylgdmpaekldeqaatlvrealkvsfpce

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ijfB (B:)
gdpaertwifsgaelkqaiegklapdvsdpemrrlvsvakssayiagvadltsgsdwcga
gavapheltdriytylgdmpaekldeqaatlvrealkvsfpceqksn

    Sequence, based on observed residues (ATOM records):
    >6ijfB (B:)
ertwifsgaelkqaiegklapdvsdpemrrlvsvakssayiagvadltsgsdwcgagava
pheltdriytylgdmpaekldeqaatlvrealkvsfpce

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ijfC (C:)
mmrvnfdtlysnypssdpshpnylsqrdlfteigwesfignpnyhntcairvsiafvksg
inivpsshriqkgpyagkgievnmrrlatlmkrtsylgepdpytpatarngigarngvva
fnnipgytggghidlvrggseatqcasacyynsetiwfwplqas

    Sequence, based on observed residues (ATOM records):
    >6ijfC (C:)
mrvnfdtlysnypssdpshpnylsqrdlfteigwesfignpnyhntcairvsiafvksgi
nivpsshriqkgpyagkgievnmrrlatlmkrtsylgepdpytpatarngigarngvvaf
nnipgytggghidlvrggseatqcasacyynsetiwfwplqas

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ijfD (D:)
mmrvnfdtlysnypssdpshpnylsqrdlfteigwesfignpnyhntcairvsiafvksg
inivpsshriqkgpyagkgievnmrrlatlmkrtsylgepdpytpatarngigarngvva
fnnipgytggghidlvrggseatqcasacyynsetiwfwplqas

    Sequence, based on observed residues (ATOM records):
    >6ijfD (D:)
mrvnfdtlysnypssdpshpnylsqrdlfteigwesfignpnyhntcairvsiafvksgi
nivpsshriqkgpyagkgievnmrrlatlmkrtsylgepdpytpatarngigarngvvaf
nnipgytggghidlvrggseatqcasacyynsetiwfwplqas