PDB entry 6ija

View 6ija on RCSB PDB site
Description: crystal structure of arabidopsis thaliana ugt89c1 complexed with udp- l-rhamnose
Deposited on 2018-10-09, released 2019-09-18
The last revision was dated 2019-09-18, with a file datestamp of 2019-09-13.
Experiment type: XRAY
Resolution: 3.21 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: UDP-glycosyltransferase 89C1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: UGT89C1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: UDP-glycosyltransferase 89C1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: UGT89C1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: UDP-glycosyltransferase 89C1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: UGT89C1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: UDP-glycosyltransferase 89C1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: UGT89C1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: AWU, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ijaA (A:)
mtttttkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhsp
ehfktlilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpda
ilgssflspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvi
nsfydlepefvetvktrflnhhriwtvgpllpfkagvdrggqssippakvsawldscped
nsvvyvgfgsqirltaeqtaalaaalekssvrfiwavrdaakkvnssdnsveedvipagf
eervkekglvirgwapqtmilehravgsylthlgwgsvlegmvggvmllawpmqadhffn
ttlivdklraavrvgenrdsvpdsdklarilaesaredlpervtlmklrekameaikegg
ssyknldelvaemcl

    Sequence, based on observed residues (ATOM records):
    >6ijaA (A:)
ttkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhspehfk
tlilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpdailgs
sflspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvinsfy
dlepefvetvktrflnhhriwtvgpllpfkdrggqssippakvsawldscpednsvvyvg
fgsqirltaeqtaalaaalekssvrfiwavrdaakkpagfeervkekglvirgwapqtmi
lehravgsylthlgwgsvlegmvggvmllawpmqadhffnttlivdklraavrvgenrds
vpdsdklarilaesaredlpervtlmklrekameaikeggssyknldelvaemcl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ijaB (B:)
mtttttkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhsp
ehfktlilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpda
ilgssflspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvi
nsfydlepefvetvktrflnhhriwtvgpllpfkagvdrggqssippakvsawldscped
nsvvyvgfgsqirltaeqtaalaaalekssvrfiwavrdaakkvnssdnsveedvipagf
eervkekglvirgwapqtmilehravgsylthlgwgsvlegmvggvmllawpmqadhffn
ttlivdklraavrvgenrdsvpdsdklarilaesaredlpervtlmklrekameaikegg
ssyknldelvaemcl

    Sequence, based on observed residues (ATOM records):
    >6ijaB (B:)
tkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhspehfkt
lilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpdailgss
flspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvinsfyd
lepefvetvktrflnhhriwtvgpllpfkdrggqssippakvsawldscpednsvvyvgf
gsqirltaeqtaalaaalekssvrfiwavrdaakpagfeervkekglvirgwapqtmile
hravgsylthlgwgsvlegmvggvmllawpmqadhffnttlivdklraavrvgenrdsvp
dsdklarilaesaredlpervtlmklrekameaikeggssyknldelvaemcl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ijaC (C:)
mtttttkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhsp
ehfktlilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpda
ilgssflspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvi
nsfydlepefvetvktrflnhhriwtvgpllpfkagvdrggqssippakvsawldscped
nsvvyvgfgsqirltaeqtaalaaalekssvrfiwavrdaakkvnssdnsveedvipagf
eervkekglvirgwapqtmilehravgsylthlgwgsvlegmvggvmllawpmqadhffn
ttlivdklraavrvgenrdsvpdsdklarilaesaredlpervtlmklrekameaikegg
ssyknldelvaemcl

    Sequence, based on observed residues (ATOM records):
    >6ijaC (C:)
tkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhspehfkt
lilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpdailgss
flspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvinsfyd
lepefvetvktrflnhhriwtvgpllpfkpakvsawldscpedyvgfgsqirltaeqtaa
laaalekssvrfiwavervkekglvipqtmilehravgsylthlgwgsvlegmvggvmll
awpmqadhffnttlivdklraavrvgenrdsvpdsdklarilaesaredlpervtlmklr
ekameaikeggssyknldelvaemcl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ijaD (D:)
mtttttkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhsp
ehfktlilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpda
ilgssflspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvi
nsfydlepefvetvktrflnhhriwtvgpllpfkagvdrggqssippakvsawldscped
nsvvyvgfgsqirltaeqtaalaaalekssvrfiwavrdaakkvnssdnsveedvipagf
eervkekglvirgwapqtmilehravgsylthlgwgsvlegmvggvmllawpmqadhffn
ttlivdklraavrvgenrdsvpdsdklarilaesaredlpervtlmklrekameaikegg
ssyknldelvaemcl

    Sequence, based on observed residues (ATOM records):
    >6ijaD (D:)
tkkphvlvipfpqsghmvphldlthqillrgatvtvlvtpknssyldalrslhspehfkt
lilpfpshpcipsgveslqqlpleaivhmfdalsrlhdplvdflsrqppsdlpdailgss
flspwinkvadafsiksisflpinahsisvmwaqedrsffndletattesyglvinsfyd
lepefvetvktrflnhhriwtvgpllpfksawldscpednsvvyvgfgsqirltaeqtaa
laaalekssvrfiwavgfeervkekglvirgwapqtmilehravgsylthlgwgsvlegm
vggvmllawpmqadhffnttlivdklraavrvgenrdsvpdsdklarilaedlpervtlm
klrekameaikeggssyknldelvaemcl