PDB entry 6iiq
View 6iiq on RCSB PDB site
Description: complex structure of the hrp3 pwwp domain with a 16-bp ta-rich dna
Deposited on
2018-10-07, released
2019-04-24
The last revision was dated
2019-04-24, with a file datestamp of
2019-04-19.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hepatoma-derived growth factor-related protein 3
Species: Homo sapiens [TaxId:9606]
Gene: HDGFL3, HDGF2, HDGFRP3, CGI-142
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Hepatoma-derived growth factor-related protein 3
Species: Homo sapiens [TaxId:9606]
Gene: HDGFL3, HDGF2, HDGFRP3, CGI-142
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Hepatoma-derived growth factor-related protein 3
Species: Homo sapiens [TaxId:9606]
Gene: HDGFL3, HDGF2, HDGFRP3, CGI-142
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: 16-bp TA-rich DNA
Species: HOMO SAPIENS, synthetic [TaxId:9606]
- Chain 'E':
Compound: 16-bp TA-rich DNA
Species: HOMO SAPIENS, synthetic [TaxId:9606]
- Chain 'F':
Compound: 16-bp TA-rich DNA
Species: HOMO SAPIENS, synthetic [TaxId:9606]
- Chain 'G':
Compound: 16-bp TA-rich DNA
Species: HOMO SAPIENS, synthetic [TaxId:9606]
- Heterogens: MLA, TRS, HOH
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence, based on SEQRES records:
>6iiqA (A:)
smarprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgp
kdlfpykeykdkfgksnkrkgfneglweiennpgvkftgy
Sequence, based on observed residues (ATOM records):
>6iiqA (A:)
marprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpk
dlfpykeykdkfgksnkrkgfneglweiennpgvkftgy
- Chain 'B':
Sequence, based on SEQRES records:
>6iiqB (B:)
smarprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgp
kdlfpykeykdkfgksnkrkgfneglweiennpgvkftgy
Sequence, based on observed residues (ATOM records):
>6iiqB (B:)
arprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkd
lfpykeykdkfgksnkrkgfneglweiennpgvkftgy
- Chain 'C':
Sequence, based on SEQRES records:
>6iiqC (C:)
smarprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgp
kdlfpykeykdkfgksnkrkgfneglweiennpgvkftgy
Sequence, based on observed residues (ATOM records):
>6iiqC (C:)
arprpreykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkd
lfpykeykdkfgksnkrkgfneglweiennpgvkftgy
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.