PDB entry 6iip

View 6iip on RCSB PDB site
Description: Apo-form structure of the HRP3 PWWP domain
Class: DNA binding protein
Keywords: growth factor, PWWP domain, Hepatoma-derived growth factor-related protein 3, DNA BINDING PROTEIN
Deposited on 2018-10-07, released 2019-04-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-24, with a file datestamp of 2019-04-19.
Experiment type: XRAY
Resolution: 0.95 Å
R-factor: N/A
AEROSPACI score: 0.87 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hepatoma-derived growth factor-related protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: HDGFL3, HDGF2, HDGFRP3, CGI-142
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y3E1 (1-87)
      • expression tag (0)
    Domains in SCOPe 2.08: d6iipa1, d6iipa2
  • Chain 'B':
    Compound: Hepatoma-derived growth factor-related protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: HDGFL3, HDGF2, HDGFRP3, CGI-142
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6iipb_
  • Heterogens: MES, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6iipA (A:)
    seykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpyk
    eykdkfgksnkrkgfneglweiennpgv
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6iipB (B:)
    seykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpyk
    eykdkfgksnkrkgfneglweiennpgv
    

    Sequence, based on observed residues (ATOM records): (download)
    >6iipB (B:)
    eykagdlvfakmkgyphwparidelpegavkppankypifffgthetaflgpkdlfpyke
    ykdkfgksnkrkgfneglweiennpgv