PDB entry 6ii4

View 6ii4 on RCSB PDB site
Description: crystal structure of h7 hemagglutinin from a/anhui/1/2013 in complex with a human neutralizing antibody l4a-14
Deposited on 2018-10-03, released 2018-10-24
The last revision was dated 2019-02-06, with a file datestamp of 2019-02-01.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1386076]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1663875]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1386076]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Hemagglutinin
    Species: Influenza A virus [TaxId:1663875]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Heavy chain of L4A-14 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6II4 (0-224)
  • Chain 'F':
    Compound: Light chain of L4A-14 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6II4 (0-211)
  • Chain 'H':
    Compound: Heavy chain of L4A-14 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6II4 (0-224)
  • Chain 'L':
    Compound: Light chain of L4A-14 Fab
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6II4 (0-211)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6ii4A (A:)
dkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgti
tgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysgi
rtngatsacrrsgssfyaemkwllsntdnaafpqmtksykntrkspalivwgihhsvsta
eqtklygsgnklvtvgssnyqqsfvpspgarpqvnglsgridfhwlmlnpndtvtfsfng
afiapdrasflrgksmgiqsgvqvdancegdcyhsggtiisnlpfqnidsravgkcpryv
kqrslllatgmknvpei

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6ii4B (B:)
aiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfe
lidnefnevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkr
qlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnr

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6ii4C (C:)
dkiclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgti
tgppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysgi
rtngatsacrrsgssfyaemkwllsntdnaafpqmtksykntrkspalivwgihhsvsta
eqtklygsgnklvtvgssnyqqsfvpspgarpqvnglsgridfhwlmlnpndtvtfsfng
afiapdrasflrgksmgiqsgvqvdancegdcyhsggtiisnlpfqnidsravgkcpryv
kqrslllatgmknvpei

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6ii4D (D:)
aiagfiengweglidgwygfrhqnaqgegtaadykstqsaidqitgklnrliektnqqfe
lidnefnevekqignvinwtrdsitevwsynaellvamenqhtidladsemdklyervkr
qlrenaeedgtgcfeifhkcdddcmasirnntydhskyreeamqnr

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ii4E (E:)
evqllesgggvvqpgrslrlscaasgftfssyaihwvrqapgkglewvalisydgsnkyy
adsvkgrftisrdnskntlylqmnslraedtavyycnghgsggevgsnwfdpwgqgtlvt
vssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

    Sequence, based on observed residues (ATOM records):
    >6ii4E (E:)
evqllesgggvvqpgrslrlscaasgftfssyaihwvrqapgkglewvalisydgsnkyy
adsvkgrftisrdnskntlylqmnslraedtavyycnghgsggevgsnwfdpwgqgtlvt
vssastkgpsvfplapssgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6ii4F (F:)
nfmltqphsvsespgktvtisctrssgsiasnyvqwyqqrpgsspttviyeynqrpsgvp
drfsgsidsssnsasltisglktedeadyycqsydsanrvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvap

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6ii4H (H:)
evqllesgggvvqpgrslrlscaasgftfssyaihwvrqapgkglewvalisydgsnkyy
adsvkgrftisrdnskntlylqmnslraedtavyycnghgsggevgsnwfdpwgqgtlvt
vssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavl
qssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

    Sequence, based on observed residues (ATOM records):
    >6ii4H (H:)
evqllesgggvvqpgrslrlscaasgftfssyaihwvrqapgkglewvalisydgsnkyy
adsvkgrftisrdnskntlylqmnslraedtavyycnghgsggevgsnwfdpwgqgtlvt
vssastkgpsvfplapssgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6ii4L (L:)
nfmltqphsvsespgktvtisctrssgsiasnyvqwyqqrpgsspttviyeynqrpsgvp
drfsgsidsssnsasltisglktedeadyycqsydsanrvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvap