PDB entry 6ii2

View 6ii2 on RCSB PDB site
Description: crystal structure of alpha-beta hydrolase (abh) and makes caterpillars floppy (mcf)-like effectors of vibrio vulnificus mo6-24/o
Deposited on 2018-10-03, released 2019-08-07
The last revision was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative RTX-toxin
    Species: Vibrio vulnificus [TaxId:672]
    Gene: rtxA1
    Database cross-references and differences (RAF-indexed):
    • PDB 6II2
  • Chain 'B':
    Compound: Putative RTX-toxin
    Species: Vibrio vulnificus [TaxId:672]
    Gene: rtxA1
    Database cross-references and differences (RAF-indexed):
    • PDB 6II2
  • Chain 'C':
    Compound: Putative RTX-toxin
    Species: Vibrio vulnificus [TaxId:672]
    Gene: rtxA1
    Database cross-references and differences (RAF-indexed):
    • PDB 6II2
  • Chain 'D':
    Compound: Putative RTX-toxin
    Species: Vibrio vulnificus [TaxId:672]
    Gene: rtxA1
    Database cross-references and differences (RAF-indexed):
    • PDB 6II2

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ii2A (A:)
msgnekhkenvaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhave
ngesqkvtlkgevgrltgyyhqgaassegetsatsgkvvlflhgsgssaeeqaseirnhy
qkqgidmlavnlrgygesdggpsekglyqdartmfnylvndkgidpsniiihgysmggpi
aadlaryaaqngqavsgllldrpmpsmtkaitahevanpagivgaiakavngqfsveknl
kglpketpillltdneglgeegeklraklaiagynvtgeqtfygheasnrlmgqyadqiv
sglfnaeqaaveagevlkglekdfkrygdalkpdtsvpgkskdirttkdflngykndhak
eivdgfrsdmsikqlvdlfvkgswsaeqkgalaweiesralkvtfqnksekynrlfreia
sagvvdakateqlapqlmllnlsndgfggrsdplsklvlvakqlendgqvgvarqllekm
ysaaavlsnptlysdsenanaskllsslaaihaknpmhdtsmkvwqeklegkqaltvngv
vekitdasangkpvlleldapghamaawakgsgddrvygfydpnagivefssaekfgdyl
trffgksdlnmaqsyklgkndageaifnrvvvmdgntlasykptfgdkttmqgildlpvf
datpmkkpgtsdvdgnakavddtkealehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ii2A (A:)
envaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhavesqkvtlkg
evgrltgyyhqgaassgkvvlflhgsgssaeeqaseirnhyqkqgidmlavnlrgygesd
ggpsekglyqdartmfnylvndkgidpsniiihgysmggpiaadlaryaaqngqavsgll
ldrpmpsmtkaitahevanpagivgaiakavngqfsveknlkglpketpillltdneglg
eegeklraklaiagynvtgeqtfygheasnrlmgqyadqivsglfnaeqaaveagevlkg
lekdfkirttkdflngykndhakeivdgfrsdmsikqlvdlfvkgswsaeqkgalaweie
sralkvtfqnksekynrlfreiasagvvdakateqlapqlmlsdplsklvlvakqlendg
qvgvarqllekmysaaavlsnptlysdsenanaskllsslaaihaknpmhdtsmkvwqek
legkqaltvngvvekitdasangkpvlleldapghamaawakgsgddrvygfydpnagiv
efssaekfgdyltrffgksdlnmaqsyklgkndageaifnrvvvmdgntlasykptfgdk
ttmqgildlpvfda

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ii2B (B:)
msgnekhkenvaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhave
ngesqkvtlkgevgrltgyyhqgaassegetsatsgkvvlflhgsgssaeeqaseirnhy
qkqgidmlavnlrgygesdggpsekglyqdartmfnylvndkgidpsniiihgysmggpi
aadlaryaaqngqavsgllldrpmpsmtkaitahevanpagivgaiakavngqfsveknl
kglpketpillltdneglgeegeklraklaiagynvtgeqtfygheasnrlmgqyadqiv
sglfnaeqaaveagevlkglekdfkrygdalkpdtsvpgkskdirttkdflngykndhak
eivdgfrsdmsikqlvdlfvkgswsaeqkgalaweiesralkvtfqnksekynrlfreia
sagvvdakateqlapqlmllnlsndgfggrsdplsklvlvakqlendgqvgvarqllekm
ysaaavlsnptlysdsenanaskllsslaaihaknpmhdtsmkvwqeklegkqaltvngv
vekitdasangkpvlleldapghamaawakgsgddrvygfydpnagivefssaekfgdyl
trffgksdlnmaqsyklgkndageaifnrvvvmdgntlasykptfgdkttmqgildlpvf
datpmkkpgtsdvdgnakavddtkealehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ii2B (B:)
envaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhavsqkvtlkge
vgrltgyyhqgaasssgkvvlflhgsgssaeeqaseirnhyqkqgidmlavnlrgygesd
ggpsekglyqdartmfnylvndkgidpsniiihgysmggpiaadlaryaaqngqavsgll
ldrpmpsmtkaitahegivgaiakavngqfsveknlkglpketpillltdneglgeegek
lraklaiagynvtgeqtfygheasnrlmgqyadqivsglfnaeqaaveagevlkglekdf
krdirttkdflngykndhakeivdgfrsdmsikqlvdlfvkgswsaeqkgalaweiesra
lkvtfqnksekynrlfreiasagvvdakateqlapqlmllsdplsklvlvakqlendgqv
gvarqllekmysaaavlsnptlysdsenanaskllsslaaihaknpmhdtsmkvwqekle
gkqaltvngvvekitdasangkpvlleldapghamaawakgsgddrvygfydpnagivef
ssaekfgdyltrffgksdlnmaqsyklgkndageaifnrvvvmdgntlasykptfgdktt
mqgildlpvfda

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ii2C (C:)
msgnekhkenvaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhave
ngesqkvtlkgevgrltgyyhqgaassegetsatsgkvvlflhgsgssaeeqaseirnhy
qkqgidmlavnlrgygesdggpsekglyqdartmfnylvndkgidpsniiihgysmggpi
aadlaryaaqngqavsgllldrpmpsmtkaitahevanpagivgaiakavngqfsveknl
kglpketpillltdneglgeegeklraklaiagynvtgeqtfygheasnrlmgqyadqiv
sglfnaeqaaveagevlkglekdfkrygdalkpdtsvpgkskdirttkdflngykndhak
eivdgfrsdmsikqlvdlfvkgswsaeqkgalaweiesralkvtfqnksekynrlfreia
sagvvdakateqlapqlmllnlsndgfggrsdplsklvlvakqlendgqvgvarqllekm
ysaaavlsnptlysdsenanaskllsslaaihaknpmhdtsmkvwqeklegkqaltvngv
vekitdasangkpvlleldapghamaawakgsgddrvygfydpnagivefssaekfgdyl
trffgksdlnmaqsyklgkndageaifnrvvvmdgntlasykptfgdkttmqgildlpvf
datpmkkpgtsdvdgnakavddtkealehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ii2C (C:)
nvaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhavqkvtlkgevg
rltgyyhqgaassgkvvlflhgsgssaeeqaseirnhyqkqgidmlavnlrgygesdggp
sekglyqdartmfnylvndkgidpsniiihgysmggpiaadlaryaaqngqavsgllldr
pmpsmtkaitahevanpagivgaiakavngqfsveknlkglpketpillltdneglgeeg
eklraklaiagynvtgeqtfygheasnrlmgqyadqivsglfnaeqaaveagevlkglek
kdflngykndhakeivsikqlvdlfsaeqkgalaweiesralkvtfqnksekynrlfrei
aakateqlapqlsdplsklvlvakqlendgqvgvarqllekmysaaavlsnptlysdsen
anaskllsslaaihaknpvwqeklegkqaltvngvvekitdkpvlleldapghamaawak
gsgddrvygfydpnagivefssaekfgdyltrffgksdlnmaqsyklgkeaifnrvvvmd
gntlasykptfgdkttmqgildlpvfda

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ii2D (D:)
msgnekhkenvaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhave
ngesqkvtlkgevgrltgyyhqgaassegetsatsgkvvlflhgsgssaeeqaseirnhy
qkqgidmlavnlrgygesdggpsekglyqdartmfnylvndkgidpsniiihgysmggpi
aadlaryaaqngqavsgllldrpmpsmtkaitahevanpagivgaiakavngqfsveknl
kglpketpillltdneglgeegeklraklaiagynvtgeqtfygheasnrlmgqyadqiv
sglfnaeqaaveagevlkglekdfkrygdalkpdtsvpgkskdirttkdflngykndhak
eivdgfrsdmsikqlvdlfvkgswsaeqkgalaweiesralkvtfqnksekynrlfreia
sagvvdakateqlapqlmllnlsndgfggrsdplsklvlvakqlendgqvgvarqllekm
ysaaavlsnptlysdsenanaskllsslaaihaknpmhdtsmkvwqeklegkqaltvngv
vekitdasangkpvlleldapghamaawakgsgddrvygfydpnagivefssaekfgdyl
trffgksdlnmaqsyklgkndageaifnrvvvmdgntlasykptfgdkttmqgildlpvf
datpmkkpgtsdvdgnakavddtkealehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6ii2D (D:)
envaiendgtpprdkeslspltrflnnelygekdarrkigeitqtlldhavsqkvtlkge
vgrltgyyhqgasgkvvlflhgsgssaeeqaseirnhyqkqgidmlavnlrgygesdggp
sekglyqdartmfnylvndkgidpsniiihgysmggpiaadlaryaaqngqavsgllldr
pmpsmtkaitahevanpagivgaiakavngqfsveknlkglpketpillltdneglgeeg
eklraklaiagynvtgeqtfygheasnrlmgqyadqivsglfnaeqaaveagevlkglek
dfkryirttkdflngykndhakeivdgfrsdmsikqlvdlfvkgswsaeqkgalaweies
ralkvtfqnksekynrlfreiasagvvdakateqlapqlmsdplsklvlvakqlengvar
qllekmysaaavlsysdsenanaskllsslaaihaknpvngvvekkpvlleldapghama
awadrvygfydpnagivefssaekfgdyltrffgnrvvvmdgntlasykmqgildlpvf