PDB entry 6ih1

View 6ih1 on RCSB PDB site
Description: crystal structure of a standalone versatile eal protein from vibrio cholerae o395 - c-di-gmp bound form
Deposited on 2018-09-28, released 2019-10-02
The last revision was dated 2020-01-22, with a file datestamp of 2020-01-17.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cyclic di nucleotide phoshodiesterase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_A1247
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: cyclic di nucleotide phoshodiesterase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_A1247
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: cyclic di nucleotide phoshodiesterase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_A1247
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: cyclic di nucleotide phoshodiesterase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [TaxId:345073]
    Gene: VC0395_A1247
    Database cross-references and differences (RAF-indexed):
  • Heterogens: C2E, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ih1A (A:)
mhiipvasdpktcscgvnensldfdftmafqpivncrtkeifgyealvrglnnesaysvi
srvnednrylfdqmcrvkaialaaklgltsklsinflpnaiyvpercirttleaakryqf
pienimfefteaervedvnhikriveyykslgfqtaiddfgsgysglnlladfqtnivkv
dmglirnihadqvrqsimknclklfsdlniqplaegveshaefawlkaagvelmqgyyfa
kpgfeslpsvnpefsea

    Sequence, based on observed residues (ATOM records):
    >6ih1A (A:)
sldfdftmafqpivncrtkeifgyealvrglnnesaysvisrvnednrylfdqmcrvkai
alaaklgltsklsinflpnaiyvpercirttleaakryqfpienimfefteaervedvnh
ikriveyykslgfqtaiddfgsgysglnlladfqtnivkvdmglirnihadqvrqsimkn
clklfsdlniqplaegveshaefawlkaagvelmqgyyfakpgfeslpsvnpefsea

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ih1B (B:)
mhiipvasdpktcscgvnensldfdftmafqpivncrtkeifgyealvrglnnesaysvi
srvnednrylfdqmcrvkaialaaklgltsklsinflpnaiyvpercirttleaakryqf
pienimfefteaervedvnhikriveyykslgfqtaiddfgsgysglnlladfqtnivkv
dmglirnihadqvrqsimknclklfsdlniqplaegveshaefawlkaagvelmqgyyfa
kpgfeslpsvnpefsea

    Sequence, based on observed residues (ATOM records):
    >6ih1B (B:)
sldfdftmafqpivncrtkeifgyealvrglnnesaysvisrvnednrylfdqmcrvkai
alaaklgltsklsinflpnaiyvpercirttleaakryqfpienimfefteaervedvnh
ikriveyykslgfqtaiddfgsgysglnlladfqtnivkvdmglirnihadqvrqsimkn
clklfsdlniqplaegveshaefawlkaagvelmqgyyfakpgfeslpsvnpefsea

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ih1C (C:)
mhiipvasdpktcscgvnensldfdftmafqpivncrtkeifgyealvrglnnesaysvi
srvnednrylfdqmcrvkaialaaklgltsklsinflpnaiyvpercirttleaakryqf
pienimfefteaervedvnhikriveyykslgfqtaiddfgsgysglnlladfqtnivkv
dmglirnihadqvrqsimknclklfsdlniqplaegveshaefawlkaagvelmqgyyfa
kpgfeslpsvnpefsea

    Sequence, based on observed residues (ATOM records):
    >6ih1C (C:)
sldfdftmafqpivncrtkeifgyealvrglnnesaysvisrvnednrylfdqmcrvkai
alaaklgltsklsinflpnaiyvpercirttleaakryqfpienimfefteaervedvnh
ikriveyykslgfqtaiddfgsgysglnlladfqtnivkvdmglirnihadqvrqsimkn
clklfsdlniqplaegveshaefawlkaagvelmqgyyfakpgfeslpsvnpefsea

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ih1D (D:)
mhiipvasdpktcscgvnensldfdftmafqpivncrtkeifgyealvrglnnesaysvi
srvnednrylfdqmcrvkaialaaklgltsklsinflpnaiyvpercirttleaakryqf
pienimfefteaervedvnhikriveyykslgfqtaiddfgsgysglnlladfqtnivkv
dmglirnihadqvrqsimknclklfsdlniqplaegveshaefawlkaagvelmqgyyfa
kpgfeslpsvnpefsea

    Sequence, based on observed residues (ATOM records):
    >6ih1D (D:)
sldfdftmafqpivncrtkeifgyealvrglnnesaysvisrvnednrylfdqmcrvkai
alaaklgltsklsinflpnaiyvpercirttleaakryqfpienimfefteaervedvnh
ikriveyykslgfqtaiddfgsgysglnlladfqtnivkvdmglirnihadqvrqsimkn
clklfsdlniqplaegveshaefawlkaagvelmqgyyfakpgfeslpsvnpefsea