SCOPe 2.08: Structural Classification of Proteins

PDB entry 6ige

View 6ige on RCSB PDB site
Description: Crystal structure of Human Papillomavirus type 33 pentamer
Class: structural protein
Keywords: capsid protein, STRUCTURAL PROTEIN
Deposited on 2018-09-25, released 2018-12-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-01-02, with a file datestamp of 2018-12-28.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igea_
Chain 'B':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igeb_
Chain 'C':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igec_
Chain 'D':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6iged_
Chain 'E':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igee_
Chain 'F':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igef_
Chain 'G':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igeg_
Chain 'H':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igeh_
Chain 'I':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igei_
Chain 'J':
Compound: Major capsid protein L1
Species: Human papillomavirus type 33 [TaxId:10586]
Gene: L1
Database cross-references and differences (RAF-indexed):
- PDB 6IGE
Domains in SCOPe 2.08: d6igej_

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>6igeA (A:)
msvwrpseatvylppvpvskvvstdeyvsrtsiyyyagssrllavghpyfsiknptnakk
llvpkvsglqyrvfrvrlpdpnkfgfpdtsfynpdtqrlvwacvgleigrgqplgvgisg
hpllnkfddtetgnkypgqpgadnreclsmdykqtqlcllgckpptgehwgkgvastnaa
pandcpplelintiiedgdmvdtgfgcmdfktlqanksdvpidicgstckypdylkmtse
pygdslffflrreqmfvrhffnragklgeavpddlyikgsgttasiqssaffptpsgsmv
tsesqlfnkpywlqraqghnngicwgnqvfvtvvdttrstnmtlctqvtsdstyknenfk
eyirhveeydlqfvfqlckvtltaevmtyihamnpdiledwqfgltpppsaslqdtyrfv
tsqaitcqktvppkekedplgkytfwevdlkekfsadldqfplgrkfllqaglkakpklk
raaptstrtssakrkkvkk