PDB entry 6ig2

View 6ig2 on RCSB PDB site
Description: structure of mitochondrial cdp-dag synthase tam41 complexed with ctp, delta 74, f240a
Deposited on 2018-09-23, released 2019-07-10
The last revision was dated 2019-08-21, with a file datestamp of 2019-08-16.
Experiment type: XRAY
Resolution: 2.88 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphatidate cytidylyltransferase, mitochondrial
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Gene: tam41, SPBC1A4.06c
    Database cross-references and differences (RAF-indexed):
    • Uniprot O74339
      • engineered mutation (233)
  • Chain 'B':
    Compound: Phosphatidate cytidylyltransferase, mitochondrial
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Gene: tam41, SPBC1A4.06c
    Database cross-references and differences (RAF-indexed):
    • Uniprot O74339
      • engineered mutation (233)
  • Chain 'C':
    Compound: Phosphatidate cytidylyltransferase, mitochondrial
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Gene: tam41, SPBC1A4.06c
    Database cross-references and differences (RAF-indexed):
    • Uniprot O74339
      • engineered mutation (233)
  • Chain 'D':
    Compound: Phosphatidate cytidylyltransferase, mitochondrial
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Gene: tam41, SPBC1A4.06c
    Database cross-references and differences (RAF-indexed):
    • Uniprot O74339
      • engineered mutation (233)
  • Heterogens: CTP, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ig2A (A:)
mgsshhhhhhssglvprgshmshhakctvaqllkqnlltfenqriqpeeelkenltkvvn
yfqapidvavgygsgvfrqagysqkenpmidfifqvedpvkwhkinlqqnpshysfvknf
gpgfvstlqesfgtgvyynthvevegniikygvtskkdvyedlknwntmylagrfqkpvv
ilkgedefykensynlssalhvgllmladrftefdlyktivslsylgdirmsfaaenprk
venivskqiaffrklylpllyaepgvhfiessevlksmdpsdnsrylsfhqnitkdsisr
llnglplnlvkil

    Sequence, based on observed residues (ATOM records):
    >6ig2A (A:)
ctvaqllkqnlltfenqriqpeeelkenltkvvnyfqapidvavgygsgvfrnpmidfif
qvedpvkwhkinlqqnpshysfvknfgpstlqesfgtgvyynthvevegniikygvtskk
dvyedlknwntmylagrfqkpvvilkgedefykensynlssalhvgllmladrftefdly
ktivslsylgdirmsfaaenprkvenivskqiaffrklylpllyaepgvhfiessevlks
mdpsdnsrylsfhqnitkdsisrllnglplnl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ig2B (B:)
mgsshhhhhhssglvprgshmshhakctvaqllkqnlltfenqriqpeeelkenltkvvn
yfqapidvavgygsgvfrqagysqkenpmidfifqvedpvkwhkinlqqnpshysfvknf
gpgfvstlqesfgtgvyynthvevegniikygvtskkdvyedlknwntmylagrfqkpvv
ilkgedefykensynlssalhvgllmladrftefdlyktivslsylgdirmsfaaenprk
venivskqiaffrklylpllyaepgvhfiessevlksmdpsdnsrylsfhqnitkdsisr
llnglplnlvkil

    Sequence, based on observed residues (ATOM records):
    >6ig2B (B:)
ctvaqllkqnlltfenqriqpeeelkenltkvvnyfqapidvavgygsgvfrnpmidfif
qvedpvkwhkinlqqnpshysfvknfgpstlqesfgtgvyynthvevegniikygvtskk
dvyedlknwntmylagrfqkpvvilkgedefykensynlssalhvgllmladrftefdly
ktivslsylgdirmsfaaenprkvenivskqiaffrklylpllyaepgvhfiessevlks
mdpsdnsrylsfhqnitkdsisrllnglplnl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ig2C (C:)
mgsshhhhhhssglvprgshmshhakctvaqllkqnlltfenqriqpeeelkenltkvvn
yfqapidvavgygsgvfrqagysqkenpmidfifqvedpvkwhkinlqqnpshysfvknf
gpgfvstlqesfgtgvyynthvevegniikygvtskkdvyedlknwntmylagrfqkpvv
ilkgedefykensynlssalhvgllmladrftefdlyktivslsylgdirmsfaaenprk
venivskqiaffrklylpllyaepgvhfiessevlksmdpsdnsrylsfhqnitkdsisr
llnglplnlvkil

    Sequence, based on observed residues (ATOM records):
    >6ig2C (C:)
ctvaqllkqnlltfenqriqpeeelkenltkvvnyfqapidvavgygsgvfrqnpmidfi
fqvedpvkwhkinlqqnpshysfvknfgpgfvstlqesfgtgvyynthvevegniikygv
tskkdvyedlknwntmylagrfqkpvvilkgedefykensynlssalhvgllmladrfte
fdlyktivslsylgdirmsfaaenprkvenivskqiaffrklylpllyaepgvhfiesse
vlksmdpsdnsrylsfhqnitkdsisrllnglplnlvk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ig2D (D:)
mgsshhhhhhssglvprgshmshhakctvaqllkqnlltfenqriqpeeelkenltkvvn
yfqapidvavgygsgvfrqagysqkenpmidfifqvedpvkwhkinlqqnpshysfvknf
gpgfvstlqesfgtgvyynthvevegniikygvtskkdvyedlknwntmylagrfqkpvv
ilkgedefykensynlssalhvgllmladrftefdlyktivslsylgdirmsfaaenprk
venivskqiaffrklylpllyaepgvhfiessevlksmdpsdnsrylsfhqnitkdsisr
llnglplnlvkil

    Sequence, based on observed residues (ATOM records):
    >6ig2D (D:)
ctvaqllkqnlltfenqriqpeeelkenltkvvnyfqapidvavgygsgvfrqnpmidfi
fqvedpvkwhkinlqqnpshysfvknfgpgfvstlqesfgtgvyynthvevegniikygv
tskkdvyedlknwntmylagrfqkpvvilkgedefykensynlssalhvgllmladrfte
fdlyktivslsylgdirmsfaaenprkvenivskqiaffrklylpllyaepgvhfiesse
vlksmdpsdnsrylsfhqnitkdsisrllnglplnlvk