PDB entry 6ifa

View 6ifa on RCSB PDB site
Description: structure of beta-trefoil lectin from entamoeba histolytica
Deposited on 2018-09-19, released 2019-09-25
The last revision was dated 2020-04-08, with a file datestamp of 2020-04-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: lectin
    Species: Entamoeba histolytica HM-1:IMSS [TaxId:294381]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IFA (Start-128)
  • Chain 'B':
    Compound: lectin
    Species: Entamoeba histolytica HM-1:IMSS [TaxId:294381]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IFA (Start-128)
  • Chain 'C':
    Compound: lectin
    Species: Entamoeba histolytica HM-1:IMSS [TaxId:294381]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IFA (Start-128)
  • Heterogens: GOL, IPA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ifaA (A:)
msneahtlvtpegnvidiqgasqenganaiiyprhggenqlffidkqigwiisvfsrkal
tvkenmhdivqsdycslsrqqwifednpdgttiircyenpelvlsvtgnidkvclspftr
eahqlwrie

    Sequence, based on observed residues (ATOM records):
    >6ifaA (A:)
eahtlvtpegnvidiqgasqenganaiiyprhggenqlffidkqigwiisvfsrkaltvk
enmhdivqsdycslsrqqwifednpdgttiircyenpelvlsvtgnidkvclspftreah
qlwrie

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ifaB (B:)
msneahtlvtpegnvidiqgasqenganaiiyprhggenqlffidkqigwiisvfsrkal
tvkenmhdivqsdycslsrqqwifednpdgttiircyenpelvlsvtgnidkvclspftr
eahqlwrie

    Sequence, based on observed residues (ATOM records):
    >6ifaB (B:)
eahtlvtpegnvidiqgasqenganaiiyprhggenqlffidkqigwiisvfsrkaltvk
enmhdivqsdycslsrqqwifednpdgttiircyenpelvlsvtgnidkvclspftreah
qlwrie

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ifaC (C:)
msneahtlvtpegnvidiqgasqenganaiiyprhggenqlffidkqigwiisvfsrkal
tvkenmhdivqsdycslsrqqwifednpdgttiircyenpelvlsvtgnidkvclspftr
eahqlwrie

    Sequence, based on observed residues (ATOM records):
    >6ifaC (C:)
eahtlvtpegnvidiqgasqenganaiiyprhggenqlffidkqigwiisvfsrkaltvk
enmhdivqsdycslsrqqwifednpdgttiircyenpelvlsvtgnidkvclspftreah
qlwrie