PDB entry 6iec

View 6iec on RCSB PDB site
Description: structure of rvfv gn and human monoclonal antibody r17
Deposited on 2018-09-13, released 2019-04-10
The last revision was dated 2019-07-10, with a file datestamp of 2019-07-05.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NSmGnGc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: NSmGnGc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: R17 H chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-114)
  • Chain 'D':
    Compound: R17 L chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-110)
  • Chain 'E':
    Compound: NSmGnGc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: R17 H chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-114)
  • Chain 'G':
    Compound: R17 L chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-110)
  • Chain 'H':
    Compound: R17 H chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-114)
  • Chain 'I':
    Compound: NSmGnGc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: R17 H chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-114)
  • Chain 'K':
    Compound: R17 L chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-110)
  • Chain 'L':
    Compound: R17 L chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEC (0-110)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6iecA (A:)
edphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtll
eavhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcpp
kyeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcd
gqlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehkgqykgtidsgqtkre
lksfdisqcpkigghgskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkk
plcvgyervvvkrels

    Sequence, based on observed residues (ATOM records):
    >6iecA (A:)
dphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtlle
avhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcppk
yeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcdg
qlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehrelksfdisqcpkiggh
gskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkkplcvgyervvvkrel
s

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6iecB (B:)
edphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtll
eavhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcpp
kyeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcd
gqlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehkgqykgtidsgqtkre
lksfdisqcpkigghgskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkk
plcvgyervvvkrels

    Sequence, based on observed residues (ATOM records):
    >6iecB (B:)
dphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtlle
avhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcppk
yeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcdg
qlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehrelksfdisqcpkiggh
gskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkkplcvgyervvvkrel
s

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6iecC (C:)
qvqlvqsggglvkpggslrlscaasgftfsdyymswirqapgkglewvsyispggstiyy
adsvkgrftisrdnaknslylqmnslraedtavyycassadvynwfdpwgqgtlv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6iecD (D:)
syeltqppsvsvapgktaritcggnnigsksvhwyqqkpgqapvlvvyddsdrpsgiper
fsgsnsgntatltisrveagdeadyycqvwdsssdhlyvfgtgtkvtvlgq

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6iecE (E:)
edphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtll
eavhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcpp
kyeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcd
gqlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehkgqykgtidsgqtkre
lksfdisqcpkigghgskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkk
plcvgyervvvkrels

    Sequence, based on observed residues (ATOM records):
    >6iecE (E:)
dphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtlle
avhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcppk
yeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcdg
qlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehrelksfdisqcpkiggh
gskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkkplcvgyervvvkrel
s

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6iecF (F:)
qvqlvqsggglvkpggslrlscaasgftfsdyymswirqapgkglewvsyispggstiyy
adsvkgrftisrdnaknslylqmnslraedtavyycassadvynwfdpwgqgtlv

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6iecG (G:)
syeltqppsvsvapgktaritcggnnigsksvhwyqqkpgqapvlvvyddsdrpsgiper
fsgsnsgntatltisrveagdeadyycqvwdsssdhlyvfgtgtkvtvlgq

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6iecH (H:)
qvqlvqsggglvkpggslrlscaasgftfsdyymswirqapgkglewvsyispggstiyy
adsvkgrftisrdnaknslylqmnslraedtavyycassadvynwfdpwgqgtlv

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6iecI (I:)
edphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtll
eavhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcpp
kyeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcd
gqlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehkgqykgtidsgqtkre
lksfdisqcpkigghgskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkk
plcvgyervvvkrels

    Sequence, based on observed residues (ATOM records):
    >6iecI (I:)
dphlrnrpgkghnyidgmtqedatckpvtyagacssfdvllekgkfplfqsyahhrtlle
avhdtiiakadppscdlqsahgnpcmkeklvmkthcpndyqsahylnndgkmasvkcppk
yeltedcnfcrqmtgaslkkgsyplqdlfcqsseddgsklktkmkgvcevgvqalkkcdg
qlstahevvpfavfknskkvyldkldlkteenllpdsfvcfehrelksfdisqcpkiggh
gskkctgdaafcsayectaqyanaycshangsgivqiqvsgvwkkplcvgyervvvkrel
s

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >6iecJ (J:)
qvqlvqsggglvkpggslrlscaasgftfsdyymswirqapgkglewvsyispggstiyy
adsvkgrftisrdnaknslylqmnslraedtavyycassadvynwfdpwgqgtlv

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >6iecK (K:)
syeltqppsvsvapgktaritcggnnigsksvhwyqqkpgqapvlvvyddsdrpsgiper
fsgsnsgntatltisrveagdeadyycqvwdsssdhlyvfgtgtkvtvlgq

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6iecL (L:)
syeltqppsvsvapgktaritcggnnigsksvhwyqqkpgqapvlvvyddsdrpsgiper
fsgsnsgntatltisrveagdeadyycqvwdsssdhlyvfgtgtkvtvlgq