PDB entry 6ieb

View 6ieb on RCSB PDB site
Description: Structure of RVFV Gn and human monoclonal antibody R15
Class: structural protein/immune system
Keywords: RVFV, antibody, STRUCTURAL PROTEIN, STRUCTURAL PROTEIN-IMMUNE SYSTEM complex
Deposited on 2018-09-13, released 2019-04-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-10, with a file datestamp of 2019-07-05.
Experiment type: XRAY
Resolution: 2.41 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NSmGnGc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: NSmGnGc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: R15 H chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEB (0-End)
    Domains in SCOPe 2.08: d6iebe1, d6iebe2
  • Chain 'F':
    Compound: R15 L chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEB (Start-206)
    Domains in SCOPe 2.08: d6iebf1, d6iebf2
  • Chain 'H':
    Compound: R15 H chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEB (0-217)
    Domains in SCOPe 2.08: d6iebh1, d6iebh2
  • Chain 'L':
    Compound: R15 L chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEB (0-206)
    Domains in SCOPe 2.08: d6iebl1, d6iebl2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6iebE (E:)
qvqlqesgpglvkpsetlsltctvsggsistyywswirqppgkglewigyiyysgstnyn
pslktrvtisvdtsknqfslklssvtaadtavyycarsdygdlifdywgqgtlvtvssas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep

    Sequence, based on observed residues (ATOM records): (download) 
    >6iebE (E:)
qvqlqesgpglvkpsetlsltctvsggsistyywswirqppgkglewigyiyysgstnyn
pslktrvtisvdtsknqfslklssvtaadtavyycarsdygdlifdywgqgtlvtvssas
tkgpsvfplgclvkdyfpepvtvswnsgavhtfpavlqssglyslssvvcnvnhkpsntk
vd

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6iebF (F:)
lpvltqppsvsvspgqtasitcsgdklgdkyvcwyqqkpgqspvlviyqdskrpsgiper
fsgsnsgntatltisgtqamdeadyycqacdsstvfgggtkltvlgqpkaapsvtlfpps
seelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassylslt
peqwkshrsyscqvthegstvektvap

    Sequence, based on observed residues (ATOM records): (download) 
    >6iebF (F:)
ltqppsvsvspgqtasitcsgdklgdkyvcwyqqkpgqspvlviyqdskrpsgiperfsg
snsgntatltisgtqamdeadyycqacdsstvfgggtkltvlgqpkaapsvtlfppssee
lqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassylsltpeq
wkshrsyscqvthegstvektvap

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6iebH (H:)
qvqlqesgpglvkpsetlsltctvsggsistyywswirqppgkglewigyiyysgstnyn
pslktrvtisvdtsknqfslklssvtaadtavyycarsdygdlifdywgqgtlvtvssas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep

    Sequence, based on observed residues (ATOM records): (download) 
    >6iebH (H:)
qvqlqesgpglvkpsetlsltctvsggsistyywswirqppgkglewigyiyysgstnyn
pslktrvtisvdtsknqfslklssvtaadtavyycarsdygdlifdywgqgtlvtvssas
tkgpsvfplapstaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvv
tvpssslgtqtyicnvnhkpsntkvdkrvep

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6iebL (L:)
lpvltqppsvsvspgqtasitcsgdklgdkyvcwyqqkpgqspvlviyqdskrpsgiper
fsgsnsgntatltisgtqamdeadyycqacdsstvfgggtkltvlgqpkaapsvtlfpps
seelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassylslt
peqwkshrsyscqvthegstvektvap