PDB entry 6iea

View 6iea on RCSB PDB site
Description: Structure of RVFV Gn and human monoclonal antibody R13
Class: structural protein/immune system
Keywords: RVFV, antibody, STRUCTURAL PROTEIN, STRUCTURAL PROTEIN-IMMUNE SYSTEM complex
Deposited on 2018-09-13, released 2019-04-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-10, with a file datestamp of 2019-07-05.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NSmGnGc
    Species: Rift Valley fever virus [TaxId:11588]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: R13 H chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEA (0-224)
    Domains in SCOPe 2.08: d6ieah1, d6ieah2
  • Chain 'L':
    Compound: R13 L chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IEA (0-217)
    Domains in SCOPe 2.08: d6ieal1, d6ieal2
  • Heterogens: GOL, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >6ieaH (H:)
    qvqlqesgpglvkpsqtlsltctvsggsissggyywswirqhpgkglewigyiydsgsty
    ynpslksrvtisvdtsknqfslklssvtaadtalyycaslpycsgricrprtdywgqgtl
    vtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpa
    vlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep
    

    Sequence, based on observed residues (ATOM records): (download)
    >6ieaH (H:)
    qvqlqesgpglvkpsqtlsltctvsggsissggyywswirqhpgkglewigyiydsgsty
    ynpslksrvtisvdtsknqfslklssvtaadtalyycaslpycsgricrprtdywgqgtl
    vtvssastkgpsvfplaptaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
    slssvvtvptyicnvnhkpsntkvdkrvep
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >6ieaL (L:)
    lpvltqppsssaspgesarltctlpsdinvgsyniywyqqkpgsppryllyyysdsdkgq
    gsgvpsrfsgskdasantgillisglqsedeadyycmiwpsnawvfgggtkltvlgqpka
    apsvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnk
    yaassylsltpeqwkshrsyscqvthegstvektvapt