PDB entry 6ie7

View 6ie7 on RCSB PDB site
Description: crystal structure of adcp1 tandem agenet domain 1-2 in complex with h3k9me2
Deposited on 2018-09-13, released 2019-01-16
The last revision was dated 2019-01-16, with a file datestamp of 2019-01-11.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Agenet domain-containing protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADCP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Agenet domain-containing protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADCP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Agenet domain-containing protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADCP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Agenet domain-containing protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: ADCP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: H3K9me2 peptide
    Species: Arabidopsis thaliana, synthetic [TaxId:3702]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IE7 (0-End)
  • Chain 'F':
    Compound: H3K9me2 peptide
    Species: Arabidopsis thaliana, synthetic [TaxId:3702]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IE7 (0-End)
  • Chain 'G':
    Compound: H3K9me2 peptide
    Species: Arabidopsis thaliana, synthetic [TaxId:3702]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IE7 (0-10)
  • Chain 'H':
    Compound: H3K9me2 peptide
    Species: Arabidopsis thaliana, synthetic [TaxId:3702]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IE7 (0-10)
  • Heterogens: MLY, NH4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ie7A (A:)
gplgsnrkrlpsylkpgsaveissdeigfrgswymgkvitipsssdkdsvkcqveyttlf
fdkegtkplkevvdmsqlrppappmseiekkkkivvgeevdafyndgwwegdvtevlddg
kfsvffrsskeqirfrkdelrfhrewvdgawk

    Sequence, based on observed residues (ATOM records):
    >6ie7A (A:)
psylkpgsaveissdeigfrgswymgkvitipvkcqveyttlffdkegtkplkevvdmsq
lrppappeiekkkkivvgeevdafyndgwwegdvtevlddgkfsvffrsskeqirfrkde
lrfhrewvdgawk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ie7B (B:)
gplgsnrkrlpsylkpgsaveissdeigfrgswymgkvitipsssdkdsvkcqveyttlf
fdkegtkplkevvdmsqlrppappmseiekkkkivvgeevdafyndgwwegdvtevlddg
kfsvffrsskeqirfrkdelrfhrewvdgawk

    Sequence, based on observed residues (ATOM records):
    >6ie7B (B:)
lpsylkpgsaveissdeigfrgswymgkvitipvkcqveyttlffdkegtkplkevvdms
qlrppappmkkkivvgeevdafyndgwwegdvtevlddgkfsvffrsskeqirfrkdelr
fhrewvdgawk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ie7C (C:)
gplgsnrkrlpsylkpgsaveissdeigfrgswymgkvitipsssdkdsvkcqveyttlf
fdkegtkplkevvdmsqlrppappmseiekkkkivvgeevdafyndgwwegdvtevlddg
kfsvffrsskeqirfrkdelrfhrewvdgawk

    Sequence, based on observed residues (ATOM records):
    >6ie7C (C:)
psylkpgsaveissdeigfrgswymgkvitipkcqveyttlffdkegtkplkevvdmsql
rppappkkkivvgeevdafyndgwwegdvtevlddgkfsvffrsskeqirfrkdelrfhr
ewvdgawk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ie7D (D:)
gplgsnrkrlpsylkpgsaveissdeigfrgswymgkvitipsssdkdsvkcqveyttlf
fdkegtkplkevvdmsqlrppappmseiekkkkivvgeevdafyndgwwegdvtevlddg
kfsvffrsskeqirfrkdelrfhrewvdgawk

    Sequence, based on observed residues (ATOM records):
    >6ie7D (D:)
psylkpgsaveissdeigfrgswymgkvitsvkcqveyttlffdkegtkplkevvdmsql
rppappmseiekkkkivvgeevdafyndgwwegdvtevlddgkfsvffrsskeqirfrkd
elrfhrewvdgawk

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ie7E (E:)
artkqtarkst

    Sequence, based on observed residues (ATOM records):
    >6ie7E (E:)
artkqtarks

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ie7F (F:)
artkqtarkst

    Sequence, based on observed residues (ATOM records):
    >6ie7F (F:)
artkqtarks

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6ie7G (G:)
artkqtarkst

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6ie7H (H:)
artkqtarkst