PDB entry 6idv

View 6idv on RCSB PDB site
Description: peptide asparaginyl ligases from viola yedoensis
Deposited on 2018-09-11, released 2019-05-15
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-02.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide Asparaginyl Ligases
    Species: Viola philippica [TaxId:316493]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IDV (Start-482)
  • Chain 'B':
    Compound: Peptide Asparaginyl Ligases
    Species: Viola philippica [TaxId:316493]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IDV (Start-482)
  • Heterogens: NAG, SNN, EDO, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6idvA (A:)
mqlfaagvilffllalsgtiaggldvdslqlpseaakffhndnstndddsigtrwavlia
gskgyhnyrhqadvchmyqilrkggvkdeniivfmyddiaynesnpfpgiiinkpggenv
ykgvpkdytgedinnvnflaailgnksaiiggsgkvldtspndhifiyyadhgapgkigm
pskpylyaddlvdtlkqkaatgtyksmvfyveacnagsmfegllpegtniyamaasnste
gswitycpgtpdfppefdvclgdlwsitfledcdahnlrtetvhqqfelvkkkiayastv
sqygdipiskdslsvymgtdpandnrtfvdenslrpplkvihqhdadlyhiwckynmape
gsskkieaqkqllelmshrahvdnsitligkllfgvnkaskvlntvrpvgqplvddwqcl
kamirtfethcgslseygmkhtlsfanmcnagiqkeqlaeaaaqacvtfpsnpysslaeg
fsa

    Sequence, based on observed residues (ATOM records):
    >6idvA (A:)
igtrwavliagskgyhnyrhqadvchmyqilrkggvkdeniivfmyddiaynesnpfpgi
iinkpggenvykgvpkdytgedinnvnflaailgnksaiiggsgkvldtspndhifiyya
hgapgkigmpskpylyaddlvdtlkqkaatgtyksmvfyveacnagsmfegllpegtniy
amaasnstegswitycpgtpdfppefdvclgdlwsitfledcdahnlrtetvhqqfelvk
kkiayastvsqygdipiskdslsvymgtdpandnrtfvplkvihqhdadlyhiwckynma
pegsskkieaqkqllelmshrahvdnsitligkllfgvnkaskvlntvrpvgqplvddwq
clkamirtfethcgslseygmkhtlsfanmcnagiqkeqlaeaaaqacvtfpsnpyssla
egfsa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6idvB (B:)
mqlfaagvilffllalsgtiaggldvdslqlpseaakffhndnstndddsigtrwavlia
gskgyhnyrhqadvchmyqilrkggvkdeniivfmyddiaynesnpfpgiiinkpggenv
ykgvpkdytgedinnvnflaailgnksaiiggsgkvldtspndhifiyyadhgapgkigm
pskpylyaddlvdtlkqkaatgtyksmvfyveacnagsmfegllpegtniyamaasnste
gswitycpgtpdfppefdvclgdlwsitfledcdahnlrtetvhqqfelvkkkiayastv
sqygdipiskdslsvymgtdpandnrtfvdenslrpplkvihqhdadlyhiwckynmape
gsskkieaqkqllelmshrahvdnsitligkllfgvnkaskvlntvrpvgqplvddwqcl
kamirtfethcgslseygmkhtlsfanmcnagiqkeqlaeaaaqacvtfpsnpysslaeg
fsa

    Sequence, based on observed residues (ATOM records):
    >6idvB (B:)
gtrwavliagskgyhnyrhqadvchmyqilrkggvkdeniivfmyddiaynesnpfpgii
inkpggenvykgvpkdytgedinnvnflaailgnksaiiggsgkvldtspndhifiyyah
gapgkigmpskpylyaddlvdtlkqkaatgtyksmvfyveacnagsmfegllpegtniya
maasnstegswitycpgtpdfppefdvclgdlwsitfledcdahnlrtetvhqqfelvkk
kiayastvsqygdipiskdslsvymgtdpandnrtfvdplkvihqhdadlyhiwckynma
pegsskkieaqkqllelmshrahvdnsitligkllfgvnkaskvlntvrpvgqplvddwq
clkamirtfethcgslseygmkhtlsfanmcnagiqkeqlaeaaaqacvtfpsnpyssla
egfsa