PDB entry 6ic8

View 6ic8 on RCSB PDB site
Description: crystal structure of the spoc domain of human phf3 in complex with rna polymerase ii ctd diheptapeptide phosphorylated on ser2
Deposited on 2018-12-02, released 2020-07-15
The last revision was dated 2021-10-27, with a file datestamp of 2021-10-22.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PHD finger protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: PHF3, KIAA0244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92576 (4-161)
      • expression tag (0-3)
  • Chain 'B':
    Compound: PHD finger protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: PHF3, KIAA0244
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q92576 (4-161)
      • expression tag (0-3)
  • Chain 'C':
    Compound: tyr-sep-pro-thr-ser-pro-ser-tyr-sep-pro-thr
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IC8 (0-13)
  • Chain 'D':
    Compound: tyr-sep-pro-thr-ser-pro-ser-tyr-sep-pro-thr
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IC8 (0-13)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ic8A (A:)
gamgstflarlnfiwkgfinmpsvakfvtkaypvsgspeyltedlpdsiqvggrispqtv
wdyvekikasgtkeicvvrftpvteedqisytllfayfssrkrygvaannmkqvkdmyli
plgatdkiphplvpfdgpglelhrpnlllgliirqklkrqhs

    Sequence, based on observed residues (ATOM records):
    >6ic8A (A:)
nfiwkgfinmpsvakfvtkaypvsgspeyltedlpdsiqvggrispqtvwdyvekikasg
tkeicvvrftpvteedqisytllfayfssrkrygvaannmkqvkdmyliplgatdkiphp
lvpfdgpglelhrpnlllgliirqkl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ic8B (B:)
gamgstflarlnfiwkgfinmpsvakfvtkaypvsgspeyltedlpdsiqvggrispqtv
wdyvekikasgtkeicvvrftpvteedqisytllfayfssrkrygvaannmkqvkdmyli
plgatdkiphplvpfdgpglelhrpnlllgliirqklkrqhs

    Sequence, based on observed residues (ATOM records):
    >6ic8B (B:)
nfiwkgfinmpsvakfvtkaypvsgspeyltedlpdsiqvggrispqtvwdyvekikasg
tkeicvvrftpvteedqisytllfayfssrkrygvaannmkqvkdmyliplgatdkiphp
lvpfdgpglelhrpnlllgliirqk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ic8C (C:)
ysptspsysptsps

    Sequence, based on observed residues (ATOM records):
    >6ic8C (C:)
ysptspsyspt

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ic8D (D:)
ysptspsysptsps

    Sequence, based on observed residues (ATOM records):
    >6ic8D (D:)
sptspsyspt