PDB entry 6ibo

View 6ibo on RCSB PDB site
Description: catalytic deficiency of o-glcnac transferase leads to x-linked intellectual disability
Deposited on 2018-11-30, released 2019-07-24
The last revision was dated 2019-07-31, with a file datestamp of 2019-07-26.
Experiment type: XRAY
Resolution: 2.17 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
    Species: Homo sapiens [TaxId:9606]
    Gene: ogt
    Database cross-references and differences (RAF-indexed):
    • Uniprot O15294
      • conflict (248)
  • Chain 'C':
    Compound: ala-val-ser-arg-ala
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6IBO (Start-8)
  • Heterogens: 12V, PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6iboA (A:)
gpgscpthadslnnlanikreqgnieeavrlyrkalevfpefaaahsnlasvlqqqgklq
ealmhykeairisptfadaysnmgntlkemqdvqgalqcytraiqinpafadahsnlasi
hkdsgnipeaiasyrtalklkpdfpdaycnlahclqivcdwtdydermkklvsivadqle
knrlpsvhphhsmlyplshgfrkaiaerhgnlcldkinvlhkppyehpkdlklsdgrlrv
gyvssdfgkhptshlmqsipgmhnpdkfevfcyalspddgtnfrvkvmaeanhfidlsqi
pcngkaadrihqdgihilvnmngytkgarnelfalrpapiqamwlgypgtsgalfmdyii
tdqetspaevaeqyseklaymphtffigdhanmfphlkkkavidfksnghiydnrivlng
idlkafldslpdvkivkmkcpdggdnadssntalnmpvipmntiaeavieminrgqiqit
ingfsisnglattqinnkaatgeevprtiivttrsqyglpedaivycnfnqlykidpstl
qmwanilkrvpnsvlwllrfpavgepniqqyaqnmglpqnriifspvapkeehvrrgqla
dvcldtplcnghttgmdvlwagtpmvtmpgetlasrvaasqltclgcleliaknrqeyed
iavklgtdleylkkvrgkvwkqrissplfntkqytmelerlylqmwehyaagnkpdhmik
pve

    Sequence, based on observed residues (ATOM records):
    >6iboA (A:)
thadslnnlanikreqgnieeavrlyrkalevfpefaaahsnlasvlqqqgklqealmhy
keairisptfadaysnmgntlkemqdvqgalqcytraiqinpafadahsnlasihkdsgn
ipeaiasyrtalklkpdfpdaycnlahclqivcdwtdydermkklvsivadqleknrlps
vhphhsmlyplshgfrkaiaerhgnlcldkinvlhkppyehpkdlklsdgrlrvgyvssd
fgkhptshlmqsipgmhnpdkfevfcyalspddgtnfrvkvmaeanhfidlsqipcngka
adrihqdgihilvnmngytkgarnelfalrpapiqamwlgypgtsgalfmdyiitdqets
paevaeqyseklaymphtffigdhanmfphlkkkavidfksiydnrivlngidlkaflds
lpdvkivkmlnmpvipmntiaeavieminrgqiqitingfsisnglattqinnkaatgee
vprtiivttrsqyglpedaivycnfnqlykidpstlqmwanilkrvpnsvlwllrfpavg
epniqqyaqnmglpqnriifspvapkeehvrrgqladvcldtplcnghttgmdvlwagtp
mvtmpgetlasrvaasqltclgcleliaknrqeyediavklgtdleylkkvrgkvwkqri
ssplfntkqytmelerlylqmwehyaagnkpdhmi

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6iboC (C:)
kkvavsraa

    Sequence, based on observed residues (ATOM records):
    >6iboC (C:)
avsraa