PDB entry 6ib1

View 6ib1 on RCSB PDB site
Description: icosahedrally averaged capsid of empty particle of bacteriophage p68
Deposited on 2018-11-28, released 2019-11-06
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major head protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Major head protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Major head protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Major head protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Uncharacterized protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Uncharacterized protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Uncharacterized protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Uncharacterized protein
    Species: Staphylococcus phage P68 [TaxId:204090]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ib1A (A:)
maqqstknetallvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkine
tllidialgnrfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatkl
ygngivkkqkftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdysl
nqlsetnvrkatskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdivi
lttdslksylldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflray
gdyqsqlgdtipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgml
kppfhnpefdevthwihyysfkaispffnkilitdqdvnpkpeeelqe

    Sequence, based on observed residues (ATOM records):
    >6ib1A (A:)
qstknetallvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkinetll
idialgnrfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatklygn
givkkqkftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdyslnql
setnvrkatskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdiviltt
dslksylldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflraygdy
qsqlgdtipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgmlkpp
fhnpefdevthwihyysfkaispffnkilitdq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ib1B (B:)
maqqstknetallvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkine
tllidialgnrfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatkl
ygngivkkqkftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdysl
nqlsetnvrkatskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdivi
lttdslksylldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflray
gdyqsqlgdtipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgml
kppfhnpefdevthwihyysfkaispffnkilitdqdvnpkpeeelqe

    Sequence, based on observed residues (ATOM records):
    >6ib1B (B:)
allvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkinetllidialgn
rfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatklygngivkkqk
ftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdyslnqlsetnvrk
atskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdivilttdslksyl
ldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflraygdyqsqlgdt
ipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgmlkppfhnpefd
evthwihyysfkaispffnkilitd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ib1C (C:)
maqqstknetallvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkine
tllidialgnrfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatkl
ygngivkkqkftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdysl
nqlsetnvrkatskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdivi
lttdslksylldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflray
gdyqsqlgdtipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgml
kppfhnpefdevthwihyysfkaispffnkilitdqdvnpkpeeelqe

    Sequence, based on observed residues (ATOM records):
    >6ib1C (C:)
allvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkinetllidialgn
rfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatklygngivkkqk
ftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdyslnqlsetnvrk
atskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdivilttdslksyl
ldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflraygdyqsqlgdt
ipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgmlkppfhnpefd
evthwihyysfkaispffnkilitd

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ib1D (D:)
maqqstknetallvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkine
tllidialgnrfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatkl
ygngivkkqkftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdysl
nqlsetnvrkatskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdivi
lttdslksylldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflray
gdyqsqlgdtipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgml
kppfhnpefdevthwihyysfkaispffnkilitdqdvnpkpeeelqe

    Sequence, based on observed residues (ATOM records):
    >6ib1D (D:)
qstknetallvaksaksalqdfnhdyskswtfgdkwdnsntmfetfvnkylfpkinetll
idialgnrfnwlakeqdfigqyseeyvimdtvpinmdlskneelmlkrnyprmatklygn
givkkqkftlnnndtrfnfqtladatnyalgvykkkisdinvleekemramlvdyslnql
setnvrkatskedlaskvfeailnlqnnsakynevhrasggaigqyttvsklkdiviltt
dslksylldtkiantfqiagidftdhvisfddlggvfkvtkefklqnqdsidflraygdy
qsqlgdtipvgavftydvsklkeftgnveeikpksdlyafildinsikykrytkgmlkpp
fhnpefdevthwihyysfkaispffnkilitd

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6ib1E (E:)
myegnnmrsmmgtsyedsrlnkrtelnenmsidtnksedsygvqihslskqsftgdveee

    Sequence, based on observed residues (ATOM records):
    >6ib1E (E:)
myegnnmrsmmgtsyedsrlnkrtelnenmsidtnksedsygvqihslskqsft

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6ib1F (F:)
myegnnmrsmmgtsyedsrlnkrtelnenmsidtnksedsygvqihslskqsftgdveee

    Sequence, based on observed residues (ATOM records):
    >6ib1F (F:)
myegnnmrsmmgtsyedsrlnkrtelnenmsidtnksedsygvqihslskqsftg

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6ib1G (G:)
myegnnmrsmmgtsyedsrlnkrtelnenmsidtnksedsygvqihslskqsftgdveee

    Sequence, based on observed residues (ATOM records):
    >6ib1G (G:)
myegnnmrsmmgtsyedsrlnkrteln

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6ib1H (H:)
myegnnmrsmmgtsyedsrlnkrtelnenmsidtnksedsygvqihslskqsftgdveee

    Sequence, based on observed residues (ATOM records):
    >6ib1H (H:)
myegnnmrsmmgtsyedsrlnkrtelnenmsidtnksedsygvqihslskqsftg