PDB entry 6i8h

View 6i8h on RCSB PDB site
Description: structure of the plant immune signaling node eds1 (enhanced disease susceptibility 1) in complex with nanobody enb15
Deposited on 2018-11-20, released 2019-10-02
The last revision was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 3.68 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein EDS1L
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: EDS1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: EDS1-specific nanobody
    Species: LAMA GLAMA [TaxId:9844]
    Database cross-references and differences (RAF-indexed):
    • PDB 6I8H

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6i8hA (A:)
    mafealtgingdlitrswsaskqaylteryhkeeagavvifafqpsfsekdffdpdnkss
    fgeiklnrvqfpcmrkigkgdvatvneaflknleavidprtsfqasvemavrsrkqivft
    ghssggatailatvwylekyfirnpnvyleprcvtfgaplvgdsifshalgrekwsrffv
    nfvtrfdivpritlarkasveetlphvlaqldprnssvqeseqritefytsvmrdtstva
    nqavceltgsaeailetlssflelspyrpagtfvfstekrlvavnnsdailqmlfytcqa
    sdeqewslipfrsirdhhsyeelvqsmgmklfnhldgensiesslndlgvstrgrqyvqa
    aleeekkrvenqkkiiqviqqerflkklawiedeykpkcqahkngyydsfkvsneendfk
    anvkraelagvfdevlgllkkcqlpdefegdidwiklatryrrlvepldianyhrhlkne
    dtgpymkrgrptryiyaqrgyehhilkpngmiaedvfwnkvnglnlglqleeiqetlkns
    gsecgscfwaeveelkgkpyeevevrvktlegmlrewitagevdekeiflegstfrkwwi
    tlpknhkshsplrdymmdeitdtlehhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6i8hA (A:)
    fealtgingdlitrswsaskqaylteryhkeeagavvifafqpsfsekdffdpdnkssfg
    eiklnrvqfpcmrkigkgdvatvneaflknleavidprtsfqasvemavrsrkqivftgh
    ssggatailatvwylekyfirnpnvyleprcvtfgaplvgdsifshalgrekwsrffvnf
    vtrfdivpritlarkasveetlphvlaqldprnssvqeseqritefytsvmrdtstvanq
    avceltgsaeailetlssflelspyrpagtfvfstekrlvavnnsdailqmlfytcqasd
    eqewslipfrsirdhhsyeelvqsmgmklfnhldgensiesslndlgvstrgrqyvqaal
    eeekkrvenqkkiiqviqqerflkklawiedeykpkcqahkngyydsfkvsneendfkan
    vkraelagvfdevlgllkkcqlpdefegdidwiklatryrrlvepldianyhrhlknedt
    gpymkrgrptryiyaqrgyehhilkpngmiaedvfwnkvnglnlglqleeiqetlknsgs
    ecgscfwaeveelkgkpyeevevrvktlegmlrewitagevdekeiflegstfrkwwitl
    pknhkshsplrdymmdei
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6i8hB (B:)
    qvqlqesggglvqaggslrlscagsgrtfstydmawfrqapgkerefvssisssggnvvy
    rdsvkgrftiardnaanavylqmnslkpedtavyycaakwlaadynywgqgtqvtvssaa
    aypydvpdygshhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6i8hB (B:)
    qlqesggglvqaggslrlscagsgrtfstydmawfrqapgkerefvssisssggnvvyrd
    svkgrftiardnaanavylqmnslkpedtavyycaakwlaadynywgqgtqvtvss