PDB entry 6i7b

View 6i7b on RCSB PDB site
Description: influenza a nucleoprotein docked into 3d helical structure of the wild type ribonucleoprotein complex obtained using cryoem. conformation 3.
Deposited on 2018-11-16, released 2020-02-19
The last revision was dated 2020-05-06, with a file datestamp of 2020-05-01.
Experiment type: EM
Resolution: 10 Å
R-factor: N/A
AEROSPACI score: -0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: Influenza A virus (A/Wilson-Smith/1933(H1N1)) [TaxId:381518]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: nucleoprotein
    Species: Influenza A virus (A/Wilson-Smith/1933(H1N1)) [TaxId:381518]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: nucleoprotein
    Species: Influenza A virus (A/Wilson-Smith/1933(H1N1)) [TaxId:381518]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: nucleoprotein
    Species: Influenza A virus (A/Wilson-Smith/1933(H1N1)) [TaxId:381518]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6i7bA (A:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafderrnkyle
ehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngddataglthmmiwh
snlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrg
indrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedlifla
rsalilrgsvahksclpacvygsavasgydferegyslvgidpfrllqnsqvyslirpne
npahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqiasnenmetmesstle
lrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptimaaftgntegrtsdm
rteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

    Sequence, based on observed residues (ATOM records):
    >6i7bA (A:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntdvsfqgrgvfels
dekatspivpsfdmsnegsyff

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6i7bB (B:)
ssgqisiqptfsvqrnlpf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6i7bC (C:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafderrnkyle
ehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngddataglthmmiwh
snlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrg
indrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedlifla
rsalilrgsvahksclpacvygsavasgydferegyslvgidpfrllqnsqvyslirpne
npahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqiasnenmetmesstle
lrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptimaaftgntegrtsdm
rteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

    Sequence, based on observed residues (ATOM records):
    >6i7bC (C:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntdvsfqgrgvfels
dekatspivpsfdmsnegsyff

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6i7bD (D:)
ssgqisiqptfsvqrnlpf