PDB entry 6i71

View 6i71 on RCSB PDB site
Description: Structure of Fragaria ananassa O-methyltransferase in complex with S-adenosylhomocysteine
Class: transferase
Keywords: fruit ripening, strawberry, volatiles, O-methyltransferase, SAM, SAH, caffeic acid, ferulic acid, protocatechuic aldehyde, vanillin, furaneol, furaneol methyl ether, TRANSFERASE
Deposited on 2018-11-15, released 2019-11-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-11-27, with a file datestamp of 2019-11-22.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: O-methyltransferase
    Species: Fragaria ananassa [TaxId:3747]
    Gene: omt1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9M602 (10-361)
      • expression tag (9)
    Domains in SCOPe 2.08: d6i71a1, d6i71a2, d6i71a3
  • Chain 'B':
    Compound: O-methyltransferase
    Species: Fragaria ananassa [TaxId:3747]
    Gene: omt1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9M602 (10-361)
      • expression tag (9)
    Domains in SCOPe 2.08: d6i71b1, d6i71b2, d6i71b3
  • Heterogens: SAH, EDO, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6i71A (A:)
mkhhhhhhgavsdeeanlfamqlasasvlpmvlkaaieldlleimakagpgsflspsdla
sqlptknpeapvmldrmlrllasysiltcslrtlpdgkverlyclgpvckfltknedgvs
iaalclmnqdkvlveswyhlkdavldggipfnkaygmtafdyhgtdprfnkvfnkgmadh
stitmkkiletykgfeglksivdvgggtgavvnmivskypsikginfdlphviedapqyp
gvqhvggdmfvsvpkgnaifmkwichdwsdehcikflkncyaalpddgkvilaecilpva
pdtslatkgvvhmdvimlahnpggkerteqefealakgsgfqgirvccdafntyvieflk
ki

    Sequence, based on observed residues (ATOM records): (download) 
    >6i71A (A:)
avsdeeanlfamqlasasvlpmvlkaaieldlleimakagpgsflspsdlasqlptknpe
apvmldrmlrllasysiltcslrtlpdgkverlyclgpvckfltknedgvsiaalclmnq
dkvlveswyhlkdavldggipfnkaygmtafdyhgtdprfnkvfnkgmadhstitmkkil
etykgfeglksivdvgggtgavvnmivskypsikginfdlphviedapqypgvqhvggdm
fvsvpkgnaifmkwichdwsdehcikflkncyaalpddgkvilaecilpvapdtslatkg
vvhmdvimlahnpggkerteqefealakgsgfqgirvccdafntyvieflkki

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6i71B (B:)
mkhhhhhhgavsdeeanlfamqlasasvlpmvlkaaieldlleimakagpgsflspsdla
sqlptknpeapvmldrmlrllasysiltcslrtlpdgkverlyclgpvckfltknedgvs
iaalclmnqdkvlveswyhlkdavldggipfnkaygmtafdyhgtdprfnkvfnkgmadh
stitmkkiletykgfeglksivdvgggtgavvnmivskypsikginfdlphviedapqyp
gvqhvggdmfvsvpkgnaifmkwichdwsdehcikflkncyaalpddgkvilaecilpva
pdtslatkgvvhmdvimlahnpggkerteqefealakgsgfqgirvccdafntyvieflk
ki

    Sequence, based on observed residues (ATOM records): (download) 
    >6i71B (B:)
avsdeeanlfamqlasasvlpmvlkaaieldlleimakagpgsflspsdlasqlptknpe
apvmldrmlrllasysiltcslrtlpdgkverlyclgpvckfltknedgvsiaalclmnq
dkvlveswyhlkdavldggipfnkaygmtafdyhgtdprfnkvfnkgmadhstitmkkil
etykgfeglksivdvgggtgavvnmivskypsikginfdlphviedapqypgvqhvggdm
fvsvpkgnaifmkwichdwsdehcikflkncyaalpddgkvilaecilpvapdtslatkg
vvhmdvimlahnpggkerteqefealakgsgfqgirvccdafntyvieflkki