PDB entry 6i3g

View 6i3g on RCSB PDB site
Description: crystal structure of a putative peptide binding protein appa from clostridium difficile
Deposited on 2018-11-06, released 2019-04-10
The last revision was dated 2019-04-17, with a file datestamp of 2019-04-12.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ABC transporter, substrate-binding protein, family 5
    Species: Clostridioides difficile [TaxId:1496]
    Gene: appA, appA_1, BGU81_05565, BN1095_250054, BN1096_520027, BN1097_680156, SAMEA3374989_00890
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A069AL86 (22-489)
      • expression tag (11-21)
  • Heterogens: IOD, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6i3gA (A:)
    mgsshhhhhhssglevlfqgpagafanvkedslasnivyaplytyekgnlvnylaekvdf
    kdskeltiklksnlkwhdgkpitaedvlftfntvldekqnspsrqyllvgekpvkvekid
    dltvkitlptasesflygiskispipkhvfegesniakseknnnpvgsgafkfkewkkge
    sivfeknadyfggepkadsialkiipneasqeaalnngeislmktsaegyekaksnsnlq
    tytyseerlnyivfnqnisnmankevrqalsyalnrnemiesaygkegsvpaksilvpea
    dfyteegvegydqdtnkakdlldksgvkidklkigyntgrfghknyalvaqqelkkigie
    aeivpyeskaffnilfsnstecdmyvngyawglepnpyrgmfetgqycnqtkysnaeida
    lwekgftelnkekreeiykqiqqdiskdapiytidyeqnlmaaqknlkgikdakpspail
    fedwsklyve
    

    Sequence, based on observed residues (ATOM records):
    >6i3gA (A:)
    sglevlfqgpagafanvkedslasnivyaplytyekgnlvnylaekvdfkdskeltiklk
    snlkwhdgkpitaedvlftfntvldekqnspsrqyllvgekpvkvekiddltvkitlpta
    sesflygiskispipkhvfegesniakseknnnpvgsgafkfkewkkgesivfeknadyf
    ggepkadsialkiipneasqeaalnngeislmktsaegyekaksnsnlqtytyseerlny
    ivfnqnisnmankevrqalsyalnrnemiesaygkegsvpaksilvpeadfyteegvegy
    dqdtnkakdlldksgvkidklkigyntgrfghknyalvaqqelkkigieaeivpyeskaf
    fnilfsnstecdmyvngyawglepnpyrgmfetgqycnqtkysnaeidalwekgftelnk
    ekreeiykqiqqdiskdapiytidyeqnlmaaqknlkgikdakpspailfedwsklyve